FastQCFastQC Report
Wed 6 May 2015
H23V3BCXX l01n01 kb2_4_62.3410000000b0d4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH23V3BCXX l01n01 kb2_4_62.3410000000b0d4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46
Sequences flagged as poor quality0
Sequence length51
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCCTTGCAGCTCTAAAAATCGGTACATCTTGTACATCTGTCTCTTATAC12.1739130434782608No Hit
CCTCATTATAGTCTTCCTCATGCATGAATATAGTACCAGCAATCAACCCTG12.1739130434782608No Hit
CTCAGATTCTATTGTCTACAATCTCATCCACACCAATCTTAAATGTTTACG12.1739130434782608No Hit
TTATTAGGCCATGCAATTACTCAAGTAGCAAAAAAATGTAGTACTGTCTCT12.1739130434782608No Hit
GAAGAATATGAATGGAATTGGTGTTTTTTTCCTGTCTCTTATACACATCTC12.1739130434782608No Hit
CAAATTTTGAGAAAGCTTATGAAACCGTTGAAGAGAAGTTTCTTAGGTTCG12.1739130434782608No Hit
TCACTGTATTGTTCAGATGCATGTCTGAAGAGATATCTGGAAGCTAGGAAT12.1739130434782608No Hit
CCACTATAGGTATACCGAGAGAGGCTGCCGCCATGGCACCCTTATACCCAA12.1739130434782608No Hit
GACTTTTCTTGTGTCTTCTATTTTCTGGACTCAAGAGTAAAAACTGTCTCT12.1739130434782608No Hit
TTCTTAATCAGAGTGTCTTCACAAGTCTTTCTGTAATCAGTCTGTCTCTTA12.1739130434782608No Hit
GTACGGGGGATAACAGGTTGATATTCCTGTACCACCTATAATCTGTCTCTT12.1739130434782608No Hit
GATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCTG12.1739130434782608No Hit
GTATGTGAAGAAGAGAATTAGATAGCCTGATTTCAATCAACAAGCAAGTGT12.1739130434782608No Hit
CGTTTAATCATCGTTATGTTAAATCTAATCCACGCGAAGTAGAGAACGCTA12.1739130434782608No Hit
ATATTTGGTAATGCTGCTATGAAACTGTTAGTGATTGTAAGACTGCTTGCT12.1739130434782608No Hit
GCAGTCACCTTCTTATCCTTACTCTTAAGAGCATCAAGAGTCGCTACTTCC12.1739130434782608No Hit
ACTATAAGGATCTGAAAGTAGCGAAATTCCTTGGCCATTAAATGTGGTCCT12.1739130434782608No Hit
AAAGTATTCCGATTCTGCAAGTCGAAATGCCATAAGAACTTTAAGATCTGT12.1739130434782608No Hit
AGTGAAGATCATCATTCAGATCCAGACTCTTGACTGTTGTGCTTTTATTAA12.1739130434782608No Hit
GTTGTTTGGGATCCATTCCACAAAGTAGGATGAGTTCTTGTTCTGAATGTT12.1739130434782608No Hit
GTCTCAACCGTAATATCCCAATCAATGCTGTCTGCAGCCGCATCTGTACCA12.1739130434782608No Hit
CTGCTTAGATAACCGTTGTTTTGGTTTATGAGGAGCCACTGTTTTAATATC12.1739130434782608No Hit
CTTCACTACGATAAGAGGAATCTTTTTGGGAAGTAGATCCCTGTCTCTTAT12.1739130434782608No Hit
GTAATGGACAGTTTGGATCACCGACTAGTAATGGATTTGGATCTGTCTCTT12.1739130434782608No Hit
TCATATCTTTCTTACTGCGTAACAATATTTACCAAGGGTAATTTATCTGTC12.1739130434782608No Hit
GTCTTGTTTATATCTTCCCAATTCTTTATATGATCTGACAAATCTCCTCTA12.1739130434782608No Hit
TCTTATACACATCTCGAGCCCACGAGACTCGCTATGATCTCGTATGCCGTC12.1739130434782608No Hit
CTACGAGAAGGATACAGGTTTATACGTTCTGAAGCTGTCTCTTATACACAT12.1739130434782608No Hit
GTGTACGCCCAAGCAGTGAGTCGGCTGATGAGTCAAATGCCTGTCTCTTAT12.1739130434782608No Hit
AAGAAGAAGAATAAGAAGAAGAGAAAGCATGAGGAAGAAGAACTGTCTCTT12.1739130434782608No Hit
TTATTATGCTTTAACACTAAATCTTGATGATTCCCGTACTCTGCGTTGATA12.1739130434782608No Hit
GCAAAAGCATTGCCTTTCTCGTAGGAATGGATTCTTTGGGGACGTAAACGT12.1739130434782608No Hit
CTCACATATTCCTTAGATTTGAAACTCTGCATCAACTTGATAACTTGCAGA12.1739130434782608No Hit
ATGTATGAGACGCCAAGAGAACTGTACAGAAAGATTAGGCTATCGAGAACA12.1739130434782608No Hit
GAATGGAAACAATTGCGAAACAGTTTGGTATTAAGCCTGTCTCTTATACAC12.1739130434782608No Hit
TCTCAGTACACTTCTTTTCATACCTCAAGAGACTAAAACTAGTTTGAGGAG12.1739130434782608No Hit
TCTCTGTCCTTCTTAAAGTTGAAAAGTCTTTTGAAGTAATTTTTGAAGGCA12.1739130434782608No Hit
TATTTGCTGGGTGTTTTTCTTGATTGCTGAGGTATGTTCTGTCTCTTATAC12.1739130434782608No Hit
ACACAAAAGGGTGGTGGTACTCTAATTGCAATGGTATTGATACTTCAAATT12.1739130434782608No Hit
TCTCAAACTGTTGTGGTATGTGGAAACTGTCAGACAGTTCTGTGCCAGCCC12.1739130434782608No Hit
GTTCATGCTGCTTGCGCGTTAGCATTCGTGCGCACTCCTATCTGTATCTTA12.1739130434782608No Hit
CTATACATCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAATCTGTCTCT12.1739130434782608No Hit
GTAGTAGACATTGAAGAAGATAAACCCGAGTTACTGGAATAAGTCTGTCTC12.1739130434782608No Hit
ACATTATCATTCGCTTGTTGTATTGTGAATCTAAACCGCTGTATGTCTGTC12.1739130434782608No Hit
GTATTATAGTACTTCTGGAGCTAGTGATACAACTGTCTCTTATACACATCT12.1739130434782608No Hit
CACCAACAGAGTAGAATGAGAATATTGAGGAAGGAAGGAATGAATGCTGTC12.1739130434782608No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)