FastQCFastQC Report
Wed 6 May 2015
H23V3BCXX l01n01 kb2_4_38.3410000000af46.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH23V3BCXX l01n01 kb2_4_38.3410000000af46.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences115
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTTGGTATCTGTGGTGATGGATACAGGTGGCGTAAATACGGGCAGAAAA10.8695652173913043No Hit
GTCTTCCTCCAAATGAATGTTTTTCCTAATTAAATTCCCTAAAACACATAC10.8695652173913043No Hit
GGTGAAGGCTGACCGTGATGAGTCCTCTCCTTATGCTGCTATGCTTGCAGC10.8695652173913043No Hit
ACTCGATTCATTACTAGGACCTTCATCATCATCATCATCATCATCATTTTC10.8695652173913043No Hit
TTCCAATCATTGCTTTCTGTGACACAGACTCTCCAATGAGATTTGTTGACA10.8695652173913043No Hit
CCTTACGGGTTTACTCACCCGTTGACTCGCACACATGTCAGACTCCTTGGT10.8695652173913043No Hit
GTACGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.8695652173913043No Hit
GGATACACTGATGGAGTTATCAGGGTTTGGGGTATTGGTCGTTACTAGAGA10.8695652173913043No Hit
GAGGAGTTCGCTCCTCACGCCGGAACCCTCTGGGCGTACCGGACTCCCACG10.8695652173913043No Hit
GGGAATACATGGGACCAGTGCTCACGAAGGAAGGAGCCAAGAAACAAAGCT10.8695652173913043No Hit
GGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGA10.8695652173913043No Hit
CTACTACGGCTTCAGTTTCTGCTTCAGCTTTCTTCTTCTTCTTTTTCTCTG10.8695652173913043No Hit
TATCAACGCAGAGTACGGGCGGAGATTCAATTTCAATTTTCAGATCATTTG10.8695652173913043No Hit
GTACGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAT10.8695652173913043No Hit
CTCTTGAAGAGCTTAAGGTTGCTGGTATCCCAAAGAAGTTGGCTCCAACAA10.8695652173913043No Hit
TATCAACGCAGAGTACGGGGGTCTTCAAAGATCAAAAAACGCCGCTCCTCT10.8695652173913043No Hit
GAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCT10.8695652173913043No Hit
GTCCGGGGACGCGACCGATCACGCGCTGGACCTGCACTCGCCCGCCGCAGC10.8695652173913043No Hit
CACCGGAAACACTGCAATCCTGAATCTGCTTCCTCTCCTTCAGGGAAACGT10.8695652173913043No Hit
GTTGATACAAGTTCAATCAAAGGCATGTGAGGCTTCAAAGTTTGTGGCTAA10.8695652173913043No Hit
GTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCT10.8695652173913043No Hit
CATCTGTTGCAGCAATTGTAACCTGGCTACCTGATGAGTTATATGGAGGGA10.8695652173913043No Hit
GCTTTGTCGACTCTCTCTCTCTCTCAGTACCTGTAGTGAGGAGGCTGTCTC10.8695652173913043No Hit
CTCTTGGGCTCGTTGATCTGGTCAAGAGCCTCAAGAAGAGTTGGTCCCTTG10.8695652173913043No Hit
CGTAGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTCTCA10.8695652173913043No Hit
TCTTTTGGCTCGCCGTGTTTTAAAGATGTTGGAAATGGATGACGAGTATGA10.8695652173913043No Hit
ATATGATGGTTACTGAAGCTGAGGATTACTTCTCTAAATGGGGAGAGAGTG10.8695652173913043No Hit
GGTTAGAGTCAAATTCACTGATTCAGACCGTTTCATCATGAGGAACGTGAA10.8695652173913043No Hit
GTAAACATATGATGAGCCCAAACAAGAAATCCTAAGACACCAATACTGATC10.8695652173913043No Hit
GTATCAACGCAGAGTACGGGGCTGAGAAATTGCGTTCGATTACAGCTCCAC10.8695652173913043No Hit
GGCTTGTTCCCGGAGGATCGAGGAGGAGTATCTATAACGTAACGGCCAGTC10.8695652173913043No Hit
TCCTCGCACTCTCTGAGAATGCGAGCAAAGCTTCCTTGTGAATACTGACGT10.8695652173913043No Hit
ATTGAGTGGTACTCAGCATCAGGTATTCCCAGATGTTCACTGTCTATATCC10.8695652173913043No Hit
CTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGA10.8695652173913043No Hit
ATATCCTGGGCGTTCAAGGACAACGTAAAAGTCCATTCCGTAGATACCAGT10.8695652173913043No Hit
ACCCAAAGCCAAAATCATTACTTCAGTATGAGGCAATCTTTCGGAAAAAAA10.8695652173913043No Hit
GAGTAGTAGTTACCATCAAACAAACTATAACTGATTTAATGCTGTCTCTTA10.8695652173913043No Hit
ATCTCGTAGTACTTGTAGGTCGAATCCTCATTGAGCCAGTAAGAGTTGACA10.8695652173913043No Hit
GTACGGGGTCAAGTGAATAAGTGCATCAGGTGGATGCCTTGGCGATGATAG10.8695652173913043No Hit
GTCTTAGCTCCAGGCTTATTGGATTTATTCTTACCCATAAGAAGAGGATAC10.8695652173913043No Hit
TCTTAGACTCAGAAGGCTTTCCCTCAGCTTCAGCTTGGGCCTTCTTTACAA10.8695652173913043No Hit
GAAGTTTTCTCATTTTTTCTCACTCGATTTATCCCGGTTCTTCCACTTCTC10.8695652173913043No Hit
GAGTAAAAGAACAGCCTTGGATGAGAAGAAAGCCAATGCACCTAAGAAGCG10.8695652173913043No Hit
GGTTATGAGTACGACCGGGCGTGAGCGGCACTCGGTCCTCCGGATTTTCAA10.8695652173913043No Hit
GAAATAACTAGACAGATTGTTGAAACCTTGTACTCCTGTCTCTTATACACA10.8695652173913043No Hit
CTCCACAAGCGTATCAAAAGCCCGGGCTTAGGCCGCCACCGTAATCCGCGT10.8695652173913043No Hit
GAGCAATATCGATGGTAATACCACGCTCACGCTCGGCCTTAAGTTTGTCCA10.8695652173913043No Hit
GAAGTTCCTTAAGCATACGATGCGTGTTGGTATGCGGTTTGCTGAGCTCAA10.8695652173913043No Hit
GTCAAGATCAACGAAACGGAAGTCGGCGGGAGATTTAGACCATTATCCGAG10.8695652173913043No Hit
GTCCTGATAATACTCCAAGAATCCAGACAAGTGGATACTTCTGTCACCAGT10.8695652173913043No Hit
CAACTATATAGAACTGTTTGCGGAGAGAAGGAGAGGAAGAAGAGTAGTGAC10.8695652173913043No Hit
TGCTTGACACGCTTGATAAGGATATCAATTCCTTTGCCATGAGAGTCAGGG10.8695652173913043No Hit
GGATTATCGGAAAGAGATTCAGATCTCTGGAGAGAAATGAAAGTGAGAAGA10.8695652173913043No Hit
CTCCGAATGCCATCAATTGTGTTGTGCGGCAGTGAGACTGTGGGGGATAAG10.8695652173913043No Hit
ATTATGTTCAATGCCGTAGTGTTGGAAATGTACTCGGAAGATTGTGGGGGA10.8695652173913043No Hit
TGTAAACATAAGTAGAATGCAAACAATATATAGGCTGTCTCTTATACACAT10.8695652173913043No Hit
CAATAGATTCCCTAAGTTCTCTGATCTGATCACCTAAACCACCCACAGCTG10.8695652173913043No Hit
TAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAG10.8695652173913043No Hit
TATTCTGCCTGAGGGCCAGCTTCATCTTCATCCTCTGGCTTAGTCTCCTCA10.8695652173913043No Hit
CTGTCTGACATGTTAGATCAAGCAAGTTCTTGATATTCAGGTAATTAGCAG10.8695652173913043No Hit
GTTGTCTGCTCAAGCTGTGGGTTCAGTGAGACTTGCTCTAGCAACAAATCT10.8695652173913043No Hit
GTTCCGGACTTATACAAACACCATACAAATGTTCCAAGATACCAGGACTGT10.8695652173913043No Hit
GATTTTGACTTAGTTTATTTCTTGAATTCGACTTTACTTCTGTCTCTTATA10.8695652173913043No Hit
CTGAATTAGAATGAGAGGTTCACCACCACATCATTGCATGCAAGGGGAGCT10.8695652173913043No Hit
CCCAGATACCGCTCAGCAACAGCGGGGCAAAACCGCCGAGGGTCGAGGCGA10.8695652173913043No Hit
ATAGAACTCAAAGTTGGGATTACTCTGCATGAACAAGCATTTACATCTGTC10.8695652173913043No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTAC10.8695652173913043No Hit
AGATGGTGGTTCTGGTCATGGACACGTTCATGGTGAGGGAATGGGAACTGT10.8695652173913043No Hit
CTACTTAGATGTTTCAGTTCACTGCGTCTTCCTCTACATTACCTTAACAGT10.8695652173913043No Hit
ATGCTGTGAGATGCCTGTTGGATACATTCAGATTCCTGTTGGGATTGCTGG10.8695652173913043No Hit
CATTTCTAGTCGTTTCCTTGTTTATCATTGTGAAGACTATAATGACCTGTC10.8695652173913043No Hit
GCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAAC10.8695652173913043No Hit
ATATGCACATATACTCTCAGCATTCTTTTGCTGCCCAGGAGGGAGACACTA10.8695652173913043No Hit
AGTTATTCAGATCGCCGAATTTGCAGTAAGGAGACGAAAATATGGTGCACG10.8695652173913043No Hit
ATTCCATAATTCCATTTTTTAATTAAGAGGCAAGGAGGAATACCGCTTTAG10.8695652173913043No Hit
GAAAGAGAAGATGTCTGAGAAAAAGGGAAGGAAAGAGGAAGTGATTACCAG10.8695652173913043No Hit
GAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCT10.8695652173913043No Hit
GGGTTCTTGAAAATCTTTTCCGGATGACGAATCACTTTGCTGCCGAGATTG10.8695652173913043No Hit
GACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTTTGAAAA10.8695652173913043No Hit
GTTCGAATTCTGATCGCTTTTACGCGAGAAAGGGGGACAACCCTCTAAGCC10.8695652173913043No Hit
AGACAAGGAGATTCTTGAGATTGTGAAGGAGAGTTTTGATTTCAGGCCAGG10.8695652173913043No Hit
GTCTAAGAAGATAGTCGAATACAACAAACTAAACAACGACATAAAGATTTC10.8695652173913043No Hit
TTCTTCTTCTTAGTAACACCAAGTACTGGGAATGGATCCTGTCTCTTATAC10.8695652173913043No Hit
GATATTTTGGAATGTTGTCAGTGGATCTTTATGGTGCTAGACATGAGAACC10.8695652173913043No Hit
GGTCACGTTCGGTCATGTTATTGCCCTTGATGGTCTGAGTTTGACCGCTGC10.8695652173913043No Hit
TTCTAAGGTTTTTTACCTTAAGATGAAGGGAGATTATCATAGGTATTTGGC10.8695652173913043No Hit
CTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGTC10.8695652173913043No Hit
CAGTATAAAAGCACGACGCTGCCCTATGCGCTTCTTCGCATTTCTTCTCTT10.8695652173913043No Hit
GCGGTGTACTTGAGCCCCACTACATTTGTCGGCGCAGAACCACTCGACCAG10.8695652173913043No Hit
CTTATGGAGGATACATGGACAACATTTACTCCAATTATGGGATGTGTGGAC10.8695652173913043No Hit
CCGAGATCCTCCCATCAACAAAAGCCATTGCCTCCTTCAAAGTCCCTGATT10.8695652173913043No Hit
AGAGTAGCTTCTCCACACAAAAAACAAATTCATATTACTTTCTCATCTCAA10.8695652173913043No Hit
AGTTAGAGCTATAGCTGGAGTCTCAGTCACTGCTCAGCAAGAGCACTCAAA10.8695652173913043No Hit
TCCTCATACTTTGTTGAATGGATTCCAAATAACGTGAAATCAAGCGTCTGC10.8695652173913043No Hit
CTTTTGTGCAATGCCCTCATAGTTACAGAAACTCTCACTTCTTTTTCAATC10.8695652173913043No Hit
CATGTACTGATTCTTGAATACCTGCTATGTTAGAATAGTCATGTGGCTGTC10.8695652173913043No Hit
GGGTACCTTTCAGCTACACTCTTGACCCGATACCCTGAGATCTTTAACTGC10.8695652173913043No Hit
CTTTGGAACGAAGCTTCGTCTTTCTTTTTCTTAAAATCCCAAATCCGCTCT10.8695652173913043No Hit
GTTCCTAGGATGTCGGGGGTTGATTTGGAGCTTTCTCGTCACCGCATATCG10.8695652173913043No Hit
GGAAGTGCCTCAAGAAGAGACTCGTGGTGCATCTCAACAGACTTAACCTCA10.8695652173913043No Hit
GTATATCCTGTTTCTTCGTTGGAACTCTTTGGAATGGTGAAGACACTCGAG10.8695652173913043No Hit
GTTCTACATCGTCTTCACAATGGTTAGGATCCAAGAAACTAGGGAGATTCA10.8695652173913043No Hit
GTATGGGGAAGAGGAAGGATAGTGTCTTCTTTAGGAGCATTGACAATAGCG10.8695652173913043No Hit
ACTCTCCATAACAAACCTTAAAACACCATAGCACGCCCTACGAACAGCAAG10.8695652173913043No Hit
TTCTTACACGTTTCTGTGAACAGAGTTTATTCTAAAATACTCCTTAAGCTG10.8695652173913043No Hit
GTGCCAAGTACCTCCGCCACCTCCGATCAAGAACCCAATTCCGAGAATTGA10.8695652173913043No Hit
GTCACCAAGGCTGCAGTGAAGAAGGGTGCCAAATGATGAGACTTTCGTTAT10.8695652173913043No Hit
CTTCGGAGGGAACCAGCTACTAGATGGTTCGATTAGTCTTTCGCCCCTATA10.8695652173913043No Hit
CTTTCTCTCTATGCCAGTGGTCGTACAACCGGTATTGTGCTCGATTCTGGT10.8695652173913043No Hit
CCGTGAGGGAAAGGTGAAAAGAACCCTATGACGGGAGTGCAATAGAGAACC10.8695652173913043No Hit
CCACCGTAATCCGCGTCGGTCCACGCCCCGAATCGATCGGCGGACCGGATT10.8695652173913043No Hit
GGTCTTGGTTGGTCACCATGAATCACAGCGACCTGTGACCCTTGCTGTCTC10.8695652173913043No Hit
GTCAACAGTGGTCCACGTGAAGATGCTACCAGAATTGGATCTGCTGGTGTT10.8695652173913043No Hit
ACAAGAGTTCGACTCGTATTTGGTACCAAGTCGTGCCATCTCTTTCTCTCT10.8695652173913043No Hit
CCATTTGCCAGTGCTCTAGTGAAAGCGTAGTCTCACCATAACTCACAGACA10.8695652173913043No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)