FastQCFastQC Report
Wed 6 May 2015
H23V3BCXX l01n01 kb2_3_88.3410000000ab8d.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH23V3BCXX l01n01 kb2_3_88.3410000000ab8d.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length51
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGAGTTCCTTGTGTTCTAAAATCTTGCGCCCTGTCTCTTATACACATCT17.142857142857142No Hit
GTATATGGACCCATTAAAGAGCTTCTGTCTGAGCTAAACCCTCCAAAATAC17.142857142857142No Hit
CTTTCCCATTGCTTACCATTGATGTCTGGGAGCATGCTTACTACCCTGTCT17.142857142857142No Hit
ATTAGAAACGGCGATCTATATCCACCAAGTGATTGCAAAGGGACAAGTGTA17.142857142857142No Hit
GAGTAGAAGCAGCCGTAGTTTTAGGAAAAAGCGAAGCTGTCTCTTATACAC17.142857142857142No Hit
GTTCTTCCTCTCCTCGTAAGTAAGTTTCTTCAAGTTGTACCTCTTGTGTCT17.142857142857142No Hit
CCCCGAAAATGGATGGCGCTTAAGCGCGCGACCTATACCCGGCCGTCGGGG17.142857142857142No Hit
AGATACCCTGGTAGTCCATGCCGTAAACGATGTCTACCTGTCTCTTATACA17.142857142857142No Hit
CTCATAACTAATCTTGCTTTACCATCATTACTGGAGACGTTTACCTTGAGT17.142857142857142No Hit
GGTTTACTCACCCGTTGACTCGCACACATGTCAGACTCTGTCTCTTATACA17.142857142857142No Hit
GGTACGGACTCTCGTCGCTGAATGGTTTTCCAAACACTTGCTGTCTCTTAT17.142857142857142No Hit
GGTCATCAACCCGCGCAGCGACCGCATCCGCAAGATCGTCGTCGACTCCGG17.142857142857142No Hit
CCACAGATGCATCACGAACCAGATTAACCATACGCCTGTCTCTTATACACA17.142857142857142No Hit
ATCATAATCTGTTGGCTTTGAAGTTTCGTTCTCATCAGGCTCAACTGTGTC17.142857142857142No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)