FastQCFastQC Report
Wed 6 May 2015
H23V3BCXX l01n01 kb2_2_93.3410000000a55d.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH23V3BCXX l01n01 kb2_2_93.3410000000a55d.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length51
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATGTACCTCTCGATGATAATCAGACTATCACTGACGATACCAGCTGTCT15.0No Hit
TCTTTAGACAAACCAGCTTTCAAAATAGCAGGAGTCTTCTCAACCTGTCTC15.0No Hit
CAATCGCAGAGAATGAGTCTAATCATGGCAAGAACCAAACACCTGTCTCTT15.0No Hit
GGAGATTGTTCATGACTCTGGATTCAGTAATTCCCCTTTGCAGCCTGTCTC15.0No Hit
CGCTAATAGAGCAAGAACAACATTGGTCAATCTACAAAGCTGTCTCTTATA15.0No Hit
ACCTAACGTTGAGTTAAGGCGCCCAAATGCACGCTCATCAGATACCATAAA15.0No Hit
ACCCTCGAGAACTAATGTTGTCACCATAACAGCTGTCTCTTATACACATCT15.0No Hit
GCGTTGATACCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCG15.0No Hit
TTATTACATTAGCAAAAACGAAAAAAATCAAAACCCAAACCACTATCTCTG15.0No Hit
TACTTGTGCTGTTACACAAGTCTGTTAAGTTTTTAAGGACTCTTCAATGAT15.0No Hit
CCTATTATAGGCACAGTTGGTGGTTACTGGGGTAATCGCTCAAAGGCAATA15.0No Hit
GAGCTGAATTTGTTACCGAATGATAAAACCAAATGATCATGGTCACACCGG15.0No Hit
AGACAAATAATCTCTTTAATAACCTGATTCAGCGAAACCAATCCGCGGCAT15.0No Hit
GATAGAAACCGACCTGGATTACTCCGGTCTGAACTCAGATCACGTAGGACT15.0No Hit
ATCTTAATGTGATTCTTCCAGCGAAGCCTCCCTGTCTCTTATACACATCTC15.0No Hit
TTTCATACCTCAAGAGACTAAAACTAGTTTGAGGAGATTTAGAGGAGTGAT15.0No Hit
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTC15.0No Hit
ACATATTAGATATGAAGCGACTTTTAGTTGCCTTTTATATCTTGTGTTCAA15.0No Hit
CAACAAGTCTCTCCTTCATCTTGTGGTACTTCTTAGGATCTGTCTCTTATA15.0No Hit
TACTCCAAGGACGAACGCTTCGCTGTGGCTTTGATCCCTCCGGCCAAAGCT15.0No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers