FastQCFastQC Report
Wed 6 May 2015
H23V3BCXX l01n01 kb2_2_92.3410000000a540.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH23V3BCXX l01n01 kb2_2_92.3410000000a540.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length51
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATACCGTCAAGGACTGTGTGACTATTGACGTCCTTCCCCGTACGCCGGG15.0No Hit
ATCTGATTCTGGGAAGACTTCCAAAGTCGTTACCATCACTGATTGTGGTCA15.0No Hit
ATATTCAACATTCGTGTAAAGAGTGTAATCCAAATTATCATCACCGACATC15.0No Hit
TGTTTGCTCAATTCTCAGAGCTTGTGAATGATTTCTACAACAACTGTCTCT15.0No Hit
CGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTACTGTATCTTATA15.0No Hit
GATACATAGGTTCAAAAGAAGAAGAGCTTTGAGTTGCAATGCAGACAATGA15.0No Hit
CATAAAAGGTTCGTACTTGATAAAGATGCAAGGATCCCACATGGTAACGGT15.0No Hit
GCCTTCAAGTGAGCAGCAGCCTTGTCTTTGTCAGTGAAGACACCAGTAGAC15.0No Hit
AAAGTTGACGGTAAGTACCAGTACGAACTTCGTCGATAACCTGTCTCTTAT15.0No Hit
ACAGAGAGGGATATCTACACTGGAGACAAGCTTGAGATTATGATACTTAAG15.0No Hit
AGCTAAGAGTGTTAATCCGTTTAGACTTATCGGAGTCTGTCTCTTATACAC15.0No Hit
GAGGAAATAAGTGCTGAGGTAATAAATCTTCGATCCTGTCTCTTATACACA15.0No Hit
GTCTGAGTATGTTTCTGTCTCTCCGTACTTACTTATTCACGGATCTGAGAA15.0No Hit
CCTCTGCATCAGTCATTTTCACATCACTGTCCTTTGAGACACTCTTAGCAC15.0No Hit
TGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGTCTGGCTCTTGTCTAT15.0No Hit
GCGGAGATGAAAGATCAAGCTCATCGTCATCAACATCACCAACACTCTTCT15.0No Hit
TTGTTTGGATGCTTAACATACCCCTCCTCAGTGACTGTCTCTTATACACAT15.0No Hit
GGAAGTCTCTGCTTGGCCGTATTTGTTTTTTTGCTTATTAACCATATGATC15.0No Hit
AATAAGATGTGGGATGTGTTGGAACGTATCACAACCTCTTTATCCTGTCTC15.0No Hit
TTTCTAATGAAGAGCAAAACGCTGCCGTTTTCGAAGAAAATCCTTCTCTCT15.0No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers