FastQCFastQC Report
Wed 6 May 2015
H23V3BCXX l01n01 kb2_2_81.3410000000a484.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH23V3BCXX l01n01 kb2_2_81.3410000000a484.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length51
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCCAGCTCGGAGACGATCTCTTGTAAGGCAACGCAGAGGCTGAAATACC17.142857142857142No Hit
CTCTTGAAGATGATGATGAGGATGATGATGAGGTTGGTGATTGGGAATTCG17.142857142857142No Hit
CTCTTATACACATATCCGAGCCCACGAGACGACGCTATATCTCGTATGCCG17.142857142857142No Hit
GATCTGTTGTAATGTCTGATGATATTCAGATCATAAAGCAAGGCTGTGCTA17.142857142857142No Hit
GTGCAATTGGTTGCTCGACAAATCTTTCAGAAGCTGTGTCATAATCCTGTC17.142857142857142No Hit
GTACAGTAGACAAGGGCAAAGATCATACCACCGAAAGCCCAAGCAATGCCT17.142857142857142No Hit
CTAATATAGCTCCTTCAACCATACCAACGACTCTGTCTCTTATACACATCT17.142857142857142No Hit
CCTTTAGCTTATGCACCAACTCATTCTTCTCTTGCTTAATGGCTTCTCCAA17.142857142857142No Hit
CTCTTACGATAATTCTTAAGCCTCTTGACATTTTCATCATTTCCCTTGGAC17.142857142857142No Hit
GGATAATATTGTCCAGACGAGCGCCAAATCCTTCCTTCAAGTGACACAACC17.142857142857142No Hit
ATGTTAGCTAGTCTTTAAGTTAAATGCTTGGGTATTATGTCTGTCTCTTAT17.142857142857142No Hit
CTCAGGAAGGAATTCAAAAGTATTACGAAGCCCTTAAGATTGACCCACACT17.142857142857142No Hit
CTGCGTTGAAGGTGAGAAGCTTCATATTGTTGTCATGTCCTCTCGTGGTGC17.142857142857142No Hit
CTTACACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTC17.142857142857142No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)