FastQCFastQC Report
Wed 6 May 2015
H23V3BCXX l01n01 kb2_2_79.3410000000a46a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH23V3BCXX l01n01 kb2_2_79.3410000000a46a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length51
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTCATCTTAACTCAAAAGTTGAGATAGGTTCTTAGATCAGGTTCCGCCT15.555555555555555No Hit
ATACAAGGATGTATGTGAACTTTCAGGACAGAACATAAAACTTAGCATGTT15.555555555555555No Hit
CAATAGTTCAGATGAATCTTTGGTTGTATCCACTCTTCTAAATCTGTCTCT15.555555555555555No Hit
ATCTTGTCCCTCTAGGAACAGAGGGATCCTTTGTAAACTGAGCAAAAATAG15.555555555555555No Hit
GTATGTTCAGGATCTTTTGAGAGAACACAATACATGTATGACTGTCTCTTA15.555555555555555No Hit
ATCCAAAAGTGTTTTCCCCACTGTAGGTAACATACAAGAAGCCGTCTTCTT15.555555555555555No Hit
CACCAAGATGTTCACCAAGAACAATTGGGTTCTTGTTGAAATCGCTCTGTC15.555555555555555No Hit
GCTTTTCTTGGGTATTGTCATATGCATCATGTCACTCCATATGCTGTCTCT15.555555555555555No Hit
CAGTAAATCGACCTCCATCCACGACAATGCATCTTGAAACCCTGTCTCTTA15.555555555555555No Hit
TCTTCCAACCTTTTCACAATTACAGTTCACAGCGCCCTTTAGGAATCTTCA15.555555555555555No Hit
TCCACATCCTACACATTCATCATCTACACCAACCACTTCCTACACATTCAT15.555555555555555No Hit
AGATAATGGTAGGAGACATAAAATCACTAAGTACTGGATTCAACGTTACGA15.555555555555555No Hit
GTTGTTGTTGTTGTGTTTGATGTTTTGTGTTGTTTCGTTGTTTAACTTGTC15.555555555555555No Hit
ATGAAATGCTTATTTCTGACTGGACGTCAGGAGAACAATGTCTTGGGCATA15.555555555555555No Hit
TCGTTTGATGATGTGACTGAGATTGCTAGGATCATGAGACCTAGATCTGTC15.555555555555555No Hit
TCTCTCTGCTGATTCAAATGCGTGTAGTAGCTGTCTCTTATACACATCTCC15.555555555555555No Hit
CTGTGCTTCTGCCTGTTCCAGAAGCTGTCAGGTTCTCTGGCTGTCTCTTAT15.555555555555555No Hit
GCTTCCTCAGAACCAGAAAGTTAATCCATATTAGAATTCTATCCACAATCT15.555555555555555No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)