H23V3BCXX l01n01 kb2_2_71.3410000000a3d5.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23V3BCXX l01n01 kb2_2_71.3410000000a3d5.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1286
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTC	264	20.52877138413686	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGT	24	1.8662519440124419	No Hit
CTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTC	5	0.38880248833592534	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCG	3	0.23328149300155523	No Hit
CTTATACACATCTCCGAGCCCACGAGACAACATTATATCTCGTATGCCGTC	2	0.15552099533437014	No Hit
CCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAA	2	0.15552099533437014	No Hit
CTTATACACTCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTCT	2	0.15552099533437014	Illumina PCR Primer Index 11 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCAGTC	2	0.15552099533437014	No Hit
CTTATACACATCTCCGAGCCCACGAGACGACGCCATATCTCGTATGCCGTC	2	0.15552099533437014	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	40	1.4042598E-9	45.0	45
AGCCCAC	45	4.0017767E-9	40.0	17
GTATGCC	45	4.0017767E-9	40.0	42
ACGCTAT	45	4.0017767E-9	40.0	30
ATCTCGT	45	4.0017767E-9	40.0	37
GCCCACG	45	4.0017767E-9	40.0	18
CCACGAG	45	4.0017767E-9	40.0	20
TATGCCG	45	4.0017767E-9	40.0	43
GAGCCCA	45	4.0017767E-9	40.0	16
CACGAGA	45	4.0017767E-9	40.0	21
CCCACGA	45	4.0017767E-9	40.0	19
CGCTATA	45	4.0017767E-9	40.0	31
TCTCGTA	45	4.0017767E-9	40.0	38
GACGCTA	45	4.0017767E-9	40.0	29
ACGAGAC	45	4.0017767E-9	40.0	22
AGACGAC	45	4.0017767E-9	40.0	25
ATGCCGT	45	4.0017767E-9	40.0	44
CGTATGC	45	4.0017767E-9	40.0	41
GACGACG	45	4.0017767E-9	40.0	26
CGAGCCC	45	4.0017767E-9	40.0	15