H23V3BCXX l01n01 kb2_2_62.3410000000a342.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23V3BCXX l01n01 kb2_2_62.3410000000a342.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1392
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTC	249	17.887931034482758	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGT	21	1.5086206896551724	No Hit
CTTATACAATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTCT	3	0.21551724137931033	Illumina PCR Primer Index 11 (95% over 21bp)
CTCTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCG	3	0.21551724137931033	No Hit
ACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTTAA	2	0.14367816091954022	No Hit
CTCATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTC	2	0.14367816091954022	No Hit
CTTATACACATCTCCGAGCCCACGAGAGACGCTATATCTCGTATGCCGTCT	2	0.14367816091954022	Illumina PCR Primer Index 11 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	45	6.184564E-11	45.0	45
CATCTCC	60	1.6370905E-11	37.499996	9
ACATCTC	60	1.6370905E-11	37.499996	8
ATCTCCG	55	4.4383341E-10	36.818184	10
TCTCCGA	55	4.4383341E-10	36.818184	11
CACATCT	65	3.8198777E-11	34.615383	7
GTATGCC	60	1.0477379E-9	33.75	42
CTATATC	60	1.0477379E-9	33.75	33
ACGCTAT	60	1.0477379E-9	33.75	30
ATCTCGT	60	1.0477379E-9	33.75	37
TATATCT	60	1.0477379E-9	33.75	34
CCACGAG	60	1.0477379E-9	33.75	20
TATGCCG	60	1.0477379E-9	33.75	43
CACGAGA	60	1.0477379E-9	33.75	21
CCCACGA	60	1.0477379E-9	33.75	19
CGCTATA	60	1.0477379E-9	33.75	31
GCTATAT	60	1.0477379E-9	33.75	32
TCTCGTA	60	1.0477379E-9	33.75	38
GACGCTA	60	1.0477379E-9	33.75	29
TATCTCG	60	1.0477379E-9	33.75	36