H23V3BCXX l01n01 kb2_2_58.3410000000a2f0.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23V3BCXX l01n01 kb2_2_58.3410000000a2f0.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1067
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGTC	130	12.18369259606373	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGT	19	1.7806935332708531	No Hit
CTTATACACATCTCCGAGCCCACGAGACGAATTGCTATCTCGTATGCCGTC	7	0.6560449859418931	RNA PCR Primer, Index 27 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACTACTTGCAATCTCGTATGCCGTC	5	0.4686035613870665	TruSeq Adapter, Index 12 (95% over 21bp)
CTCTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCG	4	0.37488284910965325	No Hit
CTTATACACATTCTCCGAGCCCACGAGACCTTGCAGAATCTCGTATGCCGT	2	0.18744142455482662	No Hit
CCTGCTAAGTGAGTGAACAAAATTTGCTAATATCAATTAATGACCTGCATG	2	0.18744142455482662	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCCTGTCTCTTATACACATCTCCGA	2	0.18744142455482662	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGTC	2	0.18744142455482662	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCCTAT	25	1.822089E-5	45.000004	32
CCTATCT	25	1.822089E-5	45.000004	34
TCCTATC	25	1.822089E-5	45.000004	33
TGCCGTC	25	1.822089E-5	45.000004	45
TATCTCG	25	1.822089E-5	45.000004	36
GATCCTA	25	1.822089E-5	45.000004	31
CTAGATC	25	1.822089E-5	45.000004	28
ACTAGAT	25	1.822089E-5	45.000004	27
AGACTAG	25	1.822089E-5	45.000004	25
AGATCCT	25	1.822089E-5	45.000004	30
TAGATCC	25	1.822089E-5	45.000004	29
CTATCTC	25	1.822089E-5	45.000004	35
GACTAGA	25	1.822089E-5	45.000004	26
AGCCCAC	30	5.36695E-5	37.499996	17
GTATGCC	30	5.36695E-5	37.499996	42
ATCTCGT	30	5.36695E-5	37.499996	37
ATCTCCG	30	5.36695E-5	37.499996	10
CACATCT	30	5.36695E-5	37.499996	7
GCCCACG	30	5.36695E-5	37.499996	18
CCACGAG	30	5.36695E-5	37.499996	20