H23V3BCXX l01n01 kb2_2_53.3410000000a2a0.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23V3BCXX l01n01 kb2_2_53.3410000000a2a0.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1323
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGTC	151	11.413454270597127	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGT	18	1.3605442176870748	No Hit
CTTATACACATCTCCGAGCCCACGAGACTACTTGCAATCTCGTATGCCGTC	6	0.45351473922902497	TruSeq Adapter, Index 12 (95% over 21bp)
CTCTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCG	6	0.45351473922902497	No Hit
CTTATACACATCTCCGAGCCCACGAGACGAATTGCTATCTCGTATGCCGTC	5	0.3779289493575208	RNA PCR Primer, Index 27 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACTGCGACCTATCTCGTATGCCGTC	3	0.22675736961451248	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	2	0.15117157974300832	No Hit
CTTATACACATCTCCGAGCCCACGAGCCTTGCAGAATCTCGTATGCCGTCT	2	0.15117157974300832	RNA PCR Primer, Index 40 (95% over 21bp)
TCTTATACACATCTCCGAGCCCACGAGACTGCGACCTATCTCGTATGCCGT	2	0.15117157974300832	No Hit
GTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCC	2	0.15117157974300832	No Hit
GGTATCAACGCAGAGTACGGGGTATCAACTGTCTCTTATACACATCTCCGA	2	0.15117157974300832	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAGATCGTATCTCGTATGCCGT	2	0.15117157974300832	No Hit
TATACACATCTCCGAGCCCACGAGACGAATTGCTATCTCGTATGCCGTCTT	2	0.15117157974300832	RNA PCR Primer, Index 27 (95% over 23bp)
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAACTGTCTC	2	0.15117157974300832	No Hit
GTACGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2	0.15117157974300832	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCCCAC	20	4.7411676E-4	45.0	17
GTATGCC	20	4.7411676E-4	45.0	42
ATCTCGT	20	4.7411676E-4	45.0	37
GCCCACG	20	4.7411676E-4	45.0	18
TGCCGTC	20	4.7411676E-4	45.0	45
CCACGAG	20	4.7411676E-4	45.0	20
TATGCCG	20	4.7411676E-4	45.0	43
GAGCCCA	20	4.7411676E-4	45.0	16
CACGAGA	20	4.7411676E-4	45.0	21
CCCACGA	20	4.7411676E-4	45.0	19
TCTCGTA	20	4.7411676E-4	45.0	38
ACGAGAC	20	4.7411676E-4	45.0	22
ATGCCGT	20	4.7411676E-4	45.0	44
CGTATGC	20	4.7411676E-4	45.0	41
CGAGCCC	20	4.7411676E-4	45.0	15
CCGAGCC	20	4.7411676E-4	45.0	14
TCGTATG	20	4.7411676E-4	45.0	40
TCTCCGA	20	4.7411676E-4	45.0	11
CGAGACT	20	4.7411676E-4	45.0	23
TCCGAGC	20	4.7411676E-4	45.0	13