H23V3BCXX l01n01 kb2_2_49.3410000000a250.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23V3BCXX l01n01 kb2_2_49.3410000000a250.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	762080
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1778	0.23330883896703758	No Hit
CTTATACACATCTCCGAGCCCACGAGACGAATTGCTATCTCGTATGCCGTC	1313	0.17229162292672684	RNA PCR Primer, Index 27 (95% over 21bp)
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	1269	0.16651795087129959	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1156	0.15169011127440687	No Hit
GAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1123	0.14735985723283643	No Hit
GTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1064	0.13961788788578627	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	881	0.11560466092798657	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	816	0.10707537266428722	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATAGCG	20	7.0328504E-4	44.998623	5
TATGCCG	230	0.0	37.172775	43
CACGAGA	245	0.0	35.81523	21
TATCTCG	235	0.0	35.42445	36
CGAGACG	225	0.0	34.99893	23
GAGACGA	235	0.0	34.46703	24
ATCTCGT	250	0.0	34.19895	37
CCCACGA	255	0.0	33.528385	19
ACGAGAC	265	0.0	33.112194	22
TGCCGTC	260	0.0	32.883606	45
GTATGCC	265	0.0	32.263165	42
TCTCGTA	280	0.0	31.338324	38
ATGCCGT	275	0.0	31.089958	44
CCACGAG	285	0.0	29.999083	20
CCGGGTC	45	3.4900462E-5	29.99908	21
CGTATGC	295	0.0	28.982162	41
TCGTACG	135	0.0	28.332466	10
TGCTATC	285	0.0	27.630733	33
GCCCACG	310	0.0	27.5798	18
ACGCGTT	100	4.5474735E-11	26.999174	37