H23V3BCXX l01n01 kb2_2_44.3410000000a20f.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23V3BCXX l01n01 kb2_2_44.3410000000a20f.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1284
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGTC	50	3.894080996884735	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGT	15	1.1682242990654206	No Hit
CTTATACACATCTCCGAGCCCACGAGACGAATTGCTATCTCGTATGCCGTC	6	0.46728971962616817	RNA PCR Primer, Index 27 (95% over 21bp)
CTCTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCG	4	0.3115264797507788	No Hit
CTTATACACATCTCCGAGCCCACGAGACTACTTGCAATCTCGTATGCCGTC	3	0.23364485981308408	TruSeq Adapter, Index 12 (95% over 21bp)
ACTTAGATGTTTCAGTTCGCTAAGTTTTCAAAGTCCAAAGAGCTGTCTCTT	2	0.1557632398753894	No Hit
CTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTC	2	0.1557632398753894	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCCCAC	20	4.661695E-4	45.0	17
ATCCTAT	20	4.661695E-4	45.0	32
GTATGCC	20	4.661695E-4	45.0	42
ATCTCGT	20	4.661695E-4	45.0	37
CCTATCT	20	4.661695E-4	45.0	34
ATCTCCG	20	4.661695E-4	45.0	10
CACATCT	20	4.661695E-4	45.0	7
GCCCACG	20	4.661695E-4	45.0	18
TCCTATC	20	4.661695E-4	45.0	33
TGCCGTC	20	4.661695E-4	45.0	45
CCACGAG	20	4.661695E-4	45.0	20
TATGCCG	20	4.661695E-4	45.0	43
CATCTCC	20	4.661695E-4	45.0	9
GAGCCCA	20	4.661695E-4	45.0	16
CACGAGA	20	4.661695E-4	45.0	21
CCCACGA	20	4.661695E-4	45.0	19
ACATCTC	20	4.661695E-4	45.0	8
TTATACA	20	4.661695E-4	45.0	2
TACACAT	20	4.661695E-4	45.0	5
ACACATC	20	4.661695E-4	45.0	6