H23V3BCXX l01n01 kb2_2_25.3410000000a0be.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23V3BCXX l01n01 kb2_2_25.3410000000a0be.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	627828
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
GCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGA	1641	0.26137731990290336	No Hit
TGGCTAGATCGATCGGTTTCGGGTCAAATAGGAAGAACTAGAAGATTCCAC	1226	0.19527641328516726	No Hit
ATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGA	1212	0.19304650318240027	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1183	0.18842740368381147	No Hit
ACTTAGATGTTTCAGTTCGCTAAGTTTTCAAAGTCCAAAGAGCGCAGACTA	1168	0.1860382142879897	No Hit
CTCTAACGGCGTACCTTTTGCATGATGGGTCAGCGAGGAAATGGGAAGAGC	1135	0.18078199761718178	No Hit
GGGAGATACCGTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAA	1084	0.1726587536713877	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	1050	0.167243257707525	No Hit
CTTTAGGAATCTTCAGTCAAGGTACGAAGTAACTCGACTGAAAGAAGAGGG	1017	0.16198704103671707	No Hit
TTCCTAAAGGGCGCTGTGAACTGTAATTGTGAAAAGGTTGGAAGATCTGGC	953	0.15179316628121078	No Hit
TTCGTGTACCCATCGGACGGCAGCCCTTTCGGGGGTTCCTTAGGGACCGAT	931	0.1482890218340055	No Hit
CTCCAGGTCTTGTCACCAAAAACCTTCCCCGATTGACAGAACGTTCCGCTA	921	0.14669622890345763	No Hit
CTTTGGAACGAAGCTTCGTCTTTCTTTTTCTTAAAATCCCAAATCCGCTCT	904	0.14398848092152627	No Hit
CCGTTAGAGTGAGTGCGCTTGACTACTCCTTCGACTGATTGTTCGCATCGG	899	0.14319208445625237	No Hit
GGCTTAGAGGGTGGTCCCCCTTTCTCGCGTAAAAGCGATCAGAATTCGAAC	887	0.14128073293959492	No Hit
ACTATAAACAGACTCGCGACTATGGCAGGGCGGTACGCTCTGCTCTCTCGC	869	0.13841370566460875	No Hit
CTCCAAGAGAGAGGCATGGTTTTGTAGTCAAAGCAACTTCGTCACTTTCGT	837	0.13331676828685562	No Hit
CTCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTCAAATAGGAAG	780	0.12423784858273286	No Hit
CTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGG	761	0.12121154201469192	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	749	0.1193001904980345	No Hit
GACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGATAAATCCT	742	0.118185235446651	No Hit
GAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	722	0.11499964958555527	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	705	0.11229190160362391	No Hit
GAGCTAGACCAGTGAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAA	692	0.1102212707939117	No Hit
GTATTCGGAGTTTCCCTGGGGTTGGTAAGGCGAAATGGGGCCACCCTAGCC	692	0.1102212707939117	No Hit
GAATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAG	691	0.11006199150085692	No Hit
GCGTAGATTGACTGAACGCAGAAAGCCTTCCACTGGCAGGCGATCGTGTTT	689	0.10974343291474736	No Hit
GAGTACGGGGAATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACG	685	0.1091063157425282	No Hit
GTATCAACGCAGAGTACGGGGAATGCATTGGATGGATGCCCGGGCATTGAG	657	0.1046464955369942	No Hit
GTACACGAAAGTGACGAAGTTGCTTTGACTACAAAACCATGCCTCTCTCTT	653	0.10400937836477506	No Hit
GTCTAGCTCCATGGCACCGAAAATGTATCAGGGCTCAAGTGATTCACCGAA	653	0.10400937836477506	No Hit
GTTCCAAAGTGTTCACTTCTTTTTCGCCAGGTTTCATTCGATTTATTGTGG	648	0.10321298189950115	No Hit
CTACTAACGGGGTCTCGGTTGATTTCCCTTCCTTTAGCTACTTAGATGTTT	645	0.10273514402033679	No Hit
GTCCAAAGAGCGCAGACTAGCCACGGAGCTTGGATACGGTTTCCCGATCGG	638	0.10162018896895328	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	631	0.10050523391756977	No Hit
CTACTGAAGGTCGCCAAACTACGACGAGACTTTCGCCTTTTGAAGCGCCAG	631	0.10050523391756977	No Hit

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCGC	45	8.693369E-7	34.999073	5
TCGTATG	70	8.1308826E-10	32.142006	40
GTAACGC	35	2.8193675E-4	32.142006	18
ATGCTAG	45	3.4606222E-5	30.035084	1
CCGTTTA	70	2.8825525E-8	28.927805	27
CGATAGG	40	6.163958E-4	28.124254	39
CGTATGC	85	6.4719643E-9	26.469887	41
GCCCACG	90	1.1892553E-8	24.999336	18
CGAGACG	90	1.1892553E-8	24.999336	23
GAATTGC	90	1.1892553E-8	24.999336	29
GACGAAT	90	1.1892553E-8	24.999336	26
GCGCTAT	45	0.0012261246	24.999336	8
ATGTAAT	55	1.3564315E-4	24.57416	1
CGCGATG	55	1.3674835E-4	24.544802	21
ACCTATT	55	1.3674835E-4	24.544802	33
TCCGAGC	95	2.1122105E-8	23.683582	13
TATGCCG	95	2.1122105E-8	23.683582	43
CCCACGA	95	2.1122105E-8	23.683582	19
TACCTAT	70	2.701023E-5	22.499405	32
ATGGGAG	60	2.4662216E-4	22.499403	25

Summary

Basic Statistics

Per base sequence quality

Per tile sequence quality

Per sequence quality scores

Per base sequence content

Per sequence GC content

Per base N content

Sequence Length Distribution

Sequence Duplication Levels

Overrepresented sequences

Adapter Content

Kmer Content