H23V3BCXX l01n01 kb2_1_8.341000000098c6.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23V3BCXX l01n01 kb2_1_8.341000000098c6.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	329240
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCTT	687	0.2086623739521322	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGC	448	0.13607095128173977	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGATC	419	0.12726278702466287	No Hit
CTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTC	419	0.12726278702466287	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	409	0.12422548900498118	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTCCGG	20	7.0265296E-4	44.99924	30
TCTAGGG	25	0.0021051038	35.999393	2
TCCCAGA	30	0.00514241	29.999496	25
CGTATGC	75	1.6952981E-9	29.999495	41
GTATGCC	75	1.6952981E-9	29.999495	42
GTACTAA	40	6.1300263E-4	28.145899	1
TATGCCG	80	3.3778633E-9	28.124525	43
ATGCCGT	80	3.3778633E-9	28.124525	44
GCACGAC	50	7.143973E-5	26.999546	37
CTCGTAT	85	6.4464984E-9	26.47014	39
CCCACGA	85	6.4464984E-9	26.47014	19
TCCCGCA	60	8.169431E-6	26.24956	31
ATCGCCA	60	8.169431E-6	26.24956	37
CATGCTA	115	9.094947E-12	25.434351	4
GACAGCG	80	1.0491931E-7	25.312073	7
GCCCACG	90	1.1847078E-8	24.999578	18
GGCGAAT	90	1.1847078E-8	24.999578	32
CCCGGCT	55	1.3654647E-4	24.54504	15
CGAACTA	120	1.6370905E-11	24.37459	29
GTAACCC	65	1.51966215E-5	24.23036	11