H23V3BCXX l01n01 kb2_1_43.34100000009b73.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23V3BCXX l01n01 kb2_1_43.34100000009b73.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2374
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTC	626	26.36899747262005	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGT	58	2.443133951137321	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGTC	56	2.358887952822241	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGT	19	0.8003369839932603	No Hit
CTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTC	17	0.7160909856781803	No Hit
CTTATACACATCTCCGAGCCCACGAGACTGCGACCTATCTCGTATGCCGTC	12	0.5054759898904801	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCG	8	0.33698399326032014	No Hit
ATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTCTTC	6	0.2527379949452401	Illumina PCR Primer Index 11 (95% over 23bp)
TCTTATACACATCTCCGAGCCCACGAGACTGCGACCTATCTCGTATGCCGT	5	0.21061499578770007	No Hit
CTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTCT	4	0.16849199663016007	Illumina PCR Primer Index 11 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACGAATTGCTATCTCGTATGCCGTC	4	0.16849199663016007	RNA PCR Primer, Index 27 (95% over 21bp)
TCTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGT	3	0.12636899747262004	No Hit
GTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTA	3	0.12636899747262004	No Hit
CTTATACACATCTCCGAGCCCACGAGACGACGCTAGATCTCGTATGCCGTC	3	0.12636899747262004	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	90	45.000004	45
GTATGCC	95	42.63158	42
ATCTCGT	95	42.63158	37
GCCCACG	95	42.63158	18
CCACGAG	95	42.63158	20
TATGCCG	95	42.63158	43
CACGAGA	95	42.63158	21
CCCACGA	95	42.63158	19
TCTCGTA	95	42.63158	38
ACGAGAC	95	42.63158	22
ATGCCGT	95	42.63158	44
CGAGCCC	95	42.63158	15
CCGAGCC	95	42.63158	14
TCGTATG	95	42.63158	40
CTCGTAT	95	42.63158	39
CTATATC	90	42.500004	33
ACGCTAT	90	42.500004	30
TATATCT	90	42.500004	34
CGCTATA	90	42.500004	31
GCTATAT	90	42.500004	32