H23NVBCXX l02n01 6h_85.34100000004d9b.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 6h_85.34100000004d9b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1097
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTC	33	3.00820419325433	No Hit
CTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTC	24	2.187784867821331	No Hit
CTTATACACATCTCCGAGCCCACGAGACGAATTGCTATCTCGTATGCCGTC	21	1.9143117593436645	RNA PCR Primer, Index 27 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGTC	15	1.367365542388332	No Hit
CTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTC	10	0.9115770282588878	No Hit
CTTATACACATCTCCGAGCCCACGAGACTACTTGCAATCTCGTATGCCGTC	6	0.5469462169553327	TruSeq Adapter, Index 12 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACAGTGTCTTATCTCGTATGCCGTC	3	0.27347310847766637	No Hit
CTTATACACATCTCCGAGCCCACGAGACGATCGTGTATCTCGTATGCCGTC	2	0.18231540565177756	No Hit
CTTATACACATCTCCGAGCCCACGAGACTGCGACCTATCTCGTATGCCGTC	2	0.18231540565177756	No Hit
CATTTATCCTACTAAAAGTATTGGAGAAAGAAATTCGTACATCTAGGAGCT	2	0.18231540565177756	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCCCAC	25	1.822089E-5	45.000004	17
GTATGCC	25	1.822089E-5	45.000004	42
ATCTCGT	25	1.822089E-5	45.000004	37
ATCTCCG	25	1.822089E-5	45.000004	10
GCCCACG	25	1.822089E-5	45.000004	18
TGCCGTC	25	1.822089E-5	45.000004	45
CCACGAG	25	1.822089E-5	45.000004	20
TATGCCG	25	1.822089E-5	45.000004	43
CATCTCC	25	1.822089E-5	45.000004	9
GAGCCCA	25	1.822089E-5	45.000004	16
CACGAGA	25	1.822089E-5	45.000004	21
CCCACGA	25	1.822089E-5	45.000004	19
TCTCGTA	25	1.822089E-5	45.000004	38
ACGAGAC	25	1.822089E-5	45.000004	22
TATCTCG	25	1.822089E-5	45.000004	36
ATGCCGT	25	1.822089E-5	45.000004	44
CGTATGC	25	1.822089E-5	45.000004	41
CGAGCCC	25	1.822089E-5	45.000004	15
CCGAGCC	25	1.822089E-5	45.000004	14
TCGTATG	25	1.822089E-5	45.000004	40