H23NVBCXX l02n01 6h_33.341000000049ef.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 6h_33.341000000049ef.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	70272
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACGGGGTGGTATCCTGTCTCTTATACACATCTCCGA	817	1.162625227686703	No Hit
GATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGA	670	0.9534380692167577	No Hit
GATACCACCCCGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCG	570	0.8111338797814208	No Hit
GGTATCAACGCAGAGTACGGGGTGGTATCCTGTCTCTTATACACATCTCCG	559	0.7954804189435336	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCACTGTCTCTTATACACATCTCCG	507	0.7214822404371585	No Hit
TTTTTGCGTTGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATAC	409	0.5820241347905282	No Hit
TGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCG	405	0.5763319672131147	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAACTGTCTCTTATAC	373	0.5307946265938069	No Hit
TATCAACGCAGAGTACGGGGTGGTATCCTGTCTCTTATACACATCTCCGAG	351	0.49948770491803285	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCCTGTCTCTTATACACATC	266	0.37852914389799636	No Hit
GATACCACCCCGTACTCTGCGTTGATACTGTCTCTTATACACATCTCCGAG	260	0.3699908925318761	No Hit
GGTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAACTGTCTCTTATA	243	0.3457991803278688	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCTGTCTCTTATACACATCT	240	0.34153005464480873	No Hit
TTTTTGCGTTGATACCACCCCGTACTCTGCGTTGATACCCTGTCTCTTATA	239	0.34010701275045535	No Hit
GTATCAACGCAGAGTACGGGCAGTGGTATCTGTCTCTTATACACATCTCCG	226	0.32160746812386154	No Hit
ATACCACTGCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCG	225	0.3201844262295082	No Hit
ATACCACTGCCCGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCC	223	0.31733834244080145	No Hit
TTTTTGCGTTGATACCACCCCGTACTCTGCGTTGATACTGTCTCTTATACA	222	0.3159153005464481	No Hit
GGTATCAACGCAGAGTACGGGGTGGTATCACTGTCTCTTATACACATCTCC	221	0.31449225865209474	No Hit
TTTTTTGCGTTGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATA	218	0.31022313296903464	No Hit
TGATACCACCCCGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCC	217	0.3088000910746812	No Hit
GAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	212	0.3016848816029144	No Hit
GCGTTGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATC	209	0.29741575591985425	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAACTGTCTCTTATACA	209	0.29741575591985425	No Hit
GTATCAACGCAGAGTACGGGCAGTGGTATCCTGTCTCTTATACACATCTCC	208	0.2959927140255009	No Hit
GGTATCAACGCAGAGTACGGGGTGGTATCTGTCTCTTATACACATCTCCGA	203	0.28887750455373407	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	197	0.2803392531876138	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAACTGTCTCTTATA	194	0.27607012750455373	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCCTGTCTCTTATACACATCT	192	0.273224043715847	No Hit
TATCAACGCAGAGTACGGGGTGGTATCACTGTCTCTTATACACATCTCCGA	191	0.27180100182149364	No Hit
CGTTGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCT	188	0.26753187613843354	No Hit
GGTATCAACGCAGAGTACGGGCAGTGGTATCTGTCTCTTATACACATCTCC	177	0.25187841530054644	No Hit
GTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	175	0.2490323315118397	No Hit
TGATACCACCCCGTACTCTGCGTTGATACTGTCTCTTATACACATCTCCGA	171	0.24334016393442623	No Hit
TTTTTGCGTTGATACCACTGCCCGTACTCTGCGTTGATACCTGTCTCTTAT	168	0.23907103825136614	No Hit
GTATCAACGCAGAGTACGGGCAGTGGTATCAACGCAAAAACTGTCTCTTAT	168	0.23907103825136614	No Hit
ATACCACCCCGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGA	157	0.22341757741347906	No Hit
GATACCACTGCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCC	155	0.22057149362477232	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCTGTCTCTTATACACATCTC	153	0.21772540983606556	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	152	0.2163023679417122	No Hit
GTACGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	151	0.21487932604735885	No Hit
GCGTTGATACCACCCCGTACTCTGCGTTGATACTGTCTCTTATACACATCT	138	0.19637978142076504	No Hit
CGTTGATACCACCCCGTACTCTGCGTTGATACTGTCTCTTATACACATCTC	124	0.17645719489981787	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	124	0.17645719489981787	No Hit
GTATCAACGCAGAGTACGGGTGGTATCAACGCCTGTCTCTTATACACATCT	117	0.16649590163934425	No Hit
TTTTTTTGCGTTGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTAT	115	0.1636498178506375	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACCTGTCTCTTATACACATCTC	114	0.16222677595628415	No Hit
TTTTTTGCGTTGATACCACCCCGTACTCTGCGTTGATACCCTGTCTCTTAT	112	0.15938069216757741	No Hit
GTTGATACCACTGCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATC	111	0.15795765027322406	No Hit
TTTTTTGCGTTGATACCACCCCGTACTCTGCGTTGATACTGTCTCTTATAC	108	0.15368852459016394	No Hit
GATACCACTGCCCGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTC	108	0.15368852459016394	No Hit
GGTATCAACGCAGAGTACGGGGTGGTATCAACGCCTGTCTCTTATACACAT	106	0.1508424408014572	No Hit
CTTATACACATCTCCGAGCCCACGAGACCTCTACTTATCTCGTATGCCGTC	105	0.14941939890710382	No Hit
GCGTTGATACCACCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCT	103	0.14657331511839708	No Hit
TTTTTGCGTTGATACCACTGCCCGTACTCTGCGTTGATACTGTCTCTTATA	103	0.14657331511839708	No Hit
GTATCAACGCAGAGTACGGGCAGTGGTATCAACGCTGTCTCTTATACACAT	102	0.14515027322404372	No Hit
TTTTTTTTGCGTTGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTA	102	0.14515027322404372	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	101	0.14372723132969034	No Hit
TTTTTGCGTTGATACCACCCGTACTCTGCGTTGATACCTGTCTCTTATACA	99	0.1408811475409836	No Hit
TATCAACGCAGAGTACGGGCAGTGGTATCAACGCAAAAACTGTCTCTTATA	97	0.13803506375227687	No Hit
TTTTTTGCGTTGATACCACTGCCCGTACTCTGCGTTGATACCTGTCTCTTA	97	0.13803506375227687	No Hit
GTATCAACGCAGAGTACGGGCAGTGGTATCAACCTGTCTCTTATACACATC	96	0.1366120218579235	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAACTGTCTCTTATAC	96	0.1366120218579235	No Hit
GGTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA	95	0.13518897996357013	No Hit
GGTATCAACGCAGAGTACGGGCAGTGGTATCCTGTCTCTTATACACATCTC	95	0.13518897996357013	No Hit
TTTTTGCGTTGATACCACCCGTACTCTGCGTTGATACCCTGTCTCTTATAC	90	0.12807377049180327	No Hit
GGTATCAACGCAGAGTACGGGGTGGTATCAACGCTGTCTCTTATACACATC	86	0.12238160291438979	No Hit
TTTTCTGCGTTGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATA	84	0.11953551912568307	No Hit
GGTATCAACGCAGAGTACGGGTGGTATCCTGTCTCTTATACACATCTCCGA	84	0.11953551912568307	No Hit
GATACCACCCGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGA	83	0.11811247723132969	No Hit
CGTTGATACCACTGCCCGTACTCTGCGTTGATACCTGTCTCTTATACACAT	83	0.11811247723132969	No Hit
GATACCACTGCCCGTACTCTGCGTTGATACTGTCTCTTATACACATCTCCG	81	0.11526639344262295	No Hit
AAAAAGTACTCTGCGTTGATACCACCTGTCTCTTATACACATCTCCGAGCC	80	0.11384335154826959	No Hit
GCGTTGATACCACCCCGTACTCTGCGTTGATCTGTCTCTTATACACATCTC	80	0.11384335154826959	No Hit
GTATCAACGCAGAGTACGGGGCAGTGGTATCCTGTCTCTTATACACATCTC	80	0.11384335154826959	No Hit
GTTGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTC	80	0.11384335154826959	No Hit
GGTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAACTGTCTCTTAT	79	0.11242030965391621	No Hit
GGTATCAACGCAGAGTACGGGTGGTATCAACGCAAAAACTGTCTCTTATAC	77	0.10957422586520948	No Hit
CGTTGATACCACCCCGTACTCTGCGTTGATACCCTGTCTCTTATACACATC	77	0.10957422586520948	No Hit
GTATCAACGCAGAGTACGGGTGGTATCCTGTCTCTTATACACATCTCCGAG	76	0.1081511839708561	No Hit
GTATCAACGCAGAGTACGGGCAGTGGTATCACTGTCTCTTATACACATCTC	75	0.10672814207650275	No Hit
GAGTACGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	74	0.10530510018214936	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACTGTCTCTTATACACATCTCC	74	0.10530510018214936	No Hit
TATCAACGCAGAGTACGGGTGGTATCAACGCCTGTCTCTTATACACATCTC	74	0.10530510018214936	No Hit
ATACCACTGCCCGTACTCTGCGTTGATACTGTCTCTTATACACATCTCCGA	74	0.10530510018214936	No Hit
GTATCAACGCAGAGTACGGGTGGTATCAACGCAAAAACTGTCTCTTATACA	73	0.10388205828779598	No Hit
TATCAACGCAGAGTACGGGCAGTGGTATCTGTCTCTTATACACATCTCCGA	73	0.10388205828779598	No Hit
ATCAACGCAGAGTACGGGGTGGTATCAACGCTGTCTCTTATACACATCTCC	72	0.10245901639344263	No Hit
TTTTTGCGTTGATACCACTGCCCGTACTCTGCGTTGATACCCTGTCTCTTA	72	0.10245901639344263	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAACTGTCTCTTAT	71	0.10103597449908924	No Hit
TTTTTTTGCGTTGATACCACCCCGTACTCTGCGTTGATACTGTCTCTTATA	71	0.10103597449908924	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACCTGTCTCTTATACACATCTCC	71	0.10103597449908924	No Hit

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	40	6.65932E-9	45.000004	42
TGCCGTC	40	6.65932E-9	45.000004	45
CCACGAG	40	6.65932E-9	45.000004	20
TATGCCG	40	6.65932E-9	45.000004	43
TATGTAA	20	6.988102E-4	45.000004	2
TCTCGTA	40	6.65932E-9	45.000004	38
ACGAGAC	40	6.65932E-9	45.000004	22
ATGCCGT	40	6.65932E-9	45.000004	44
CTCGTAT	40	6.65932E-9	45.000004	39
TTATCTC	35	1.1902921E-7	45.0	35
TCTACTT	35	1.1902921E-7	45.0	30
CCTCTAC	35	1.1902921E-7	45.0	28
ACTTATC	35	1.1902921E-7	45.0	33
ACCTCTA	35	1.1902921E-7	45.0	27
CGAGACC	35	1.1902921E-7	45.0	23
TACTTAT	35	1.1902921E-7	45.0	32
CTACTTA	35	1.1902921E-7	45.0	31
GAGACCT	35	1.1902921E-7	45.0	24
CACGAGA	45	1.884473E-8	40.0	21
CCCACGA	45	1.884473E-8	40.0	19

Summary

Basic Statistics

Per base sequence quality

Per tile sequence quality

Per sequence quality scores

Per base sequence content

Per sequence GC content

Per base N content

Sequence Length Distribution

Sequence Duplication Levels

Overrepresented sequences

Adapter Content

Kmer Content