H23NVBCXX l02n01 6h_17.341000000048c6.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 6h_17.341000000048c6.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	325429
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACGGGGTGGTATCCTGTCTCTTATACACATCTCCGA	510	0.15671621152386542	No Hit
GATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGA	446	0.13704986341106662	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAACTGTCTCTTATAC	389	0.1195345221231052	No Hit
TTTTTGCGTTGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATAC	355	0.10908677468818083	No Hit
GGTATCAACGCAGAGTACGGGGTGGTATCCTGTCTCTTATACACATCTCCG	339	0.10417018765998114	No Hit
TGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCG	331	0.10171189414588128	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTCCGTA	25	0.0021049995	35.999634	31
ACGAAAC	25	0.0021049995	35.999634	24
TAAACGA	30	0.005142157	29.999693	21
GTTCCGT	30	0.005142157	29.999693	30
GTAAACG	30	0.005142157	29.999693	20
TAGGTTG	40	6.156939E-4	28.124712	5
TGCGTTC	40	6.156939E-4	28.124712	12
CGTTCCC	45	0.0012247389	24.999743	14
CTAATCT	45	0.0012247389	24.999743	4
GGCGTCA	55	1.3653554E-4	24.545204	12
GTTCATA	50	0.0022572465	22.506687	1
TACTGGT	50	0.0022592638	22.50323	2
CGGGTGT	50	0.0022612829	22.499771	18
GGGGGTA	100	3.6245183E-8	22.499771	18
TCTCCGA	965	0.0	21.683716	45
AAAAGTA	520	0.0	21.63772	2
TCGCTCC	75	4.589985E-5	20.999784	31
TGTAGGA	65	4.225146E-4	20.772211	2
ACAGTTC	65	4.2295316E-4	20.769018	8
CCTTGCG	65	4.2295316E-4	20.769018	15