H23NVBCXX l02n01 48h_86.34100000006d7a.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_86.34100000006d7a.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	67603
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTC	733	1.0842714080736062	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	152	0.22484209280653225	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	124	0.18342381255269735	No Hit
TTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTCT	94	0.13904708370930283	RNA PCR Primer, Index 44 (95% over 22bp)
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	91	0.1346094108249634	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	90	0.13313018653018358	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGACGAC	35	1.1895463E-7	44.99926	25
GAGACGA	35	1.1895463E-7	44.99926	24
CGAGACG	35	1.1895463E-7	44.99926	23
GACGACG	35	1.1895463E-7	44.99926	26
ACGACGC	35	1.1895463E-7	44.99926	27
TGCCGTC	100	0.0	40.499336	45
CGCTATA	40	3.3947254E-7	39.37435	31
ACGCTAT	40	3.3947254E-7	39.37435	30
GACGCTA	40	3.3947254E-7	39.37435	29
CTCGTAT	110	0.0	38.863	39
TCTCGTA	110	0.0	38.863	38
CGTATGC	105	0.0	38.570797	41
TATGCCG	105	0.0	38.570797	43
TATCTCG	105	0.0	38.570797	36
TCGTATG	105	0.0	38.570797	40
ACGAGAC	105	0.0	38.570797	22
ATCTCGT	115	0.0	37.173306	37
GCCCACG	110	0.0	36.817577	18
CACGAGA	110	0.0	36.817577	21
CCCACGA	110	0.0	36.817577	19