H23NVBCXX l02n01 48h_82.34100000006d37.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_82.34100000006d37.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	30034
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTC	487	1.62149563827662	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	128	0.42618365852034357	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	109	0.3629220217087301	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	60	0.19977358993141106	No Hit
TTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTCT	54	0.17979623093826996	RNA PCR Primer, Index 44 (95% over 22bp)
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	54	0.17979623093826996	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	80	42.18594	42
ATCTCGT	80	42.18594	37
GCCCACG	80	42.18594	18
TGCCGTC	80	42.18594	45
TATGCCG	80	42.18594	43
CAACATA	80	42.18594	28
CACGAGA	80	42.18594	21
ACGAGAC	80	42.18594	22
TATCTCG	80	42.18594	36
ACATAAT	80	42.18594	30
ATGCCGT	80	42.18594	44
CGAGCCC	80	42.18594	15
CCGAGCC	80	42.18594	14
CGAGACA	80	42.18594	23
TCCGAGC	80	42.18594	13
ATATCTC	80	42.18594	35
CTCGTAT	80	42.18594	39
CTCCGAG	80	42.18594	12
ATCTCCG	85	39.704414	10
CCACGAG	85	39.704414	20