H23NVBCXX l02n01 48h_81.34100000006d2a.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_81.34100000006d2a.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	27063
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	478	1.7662491224180614	No Hit
CTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTC	210	0.7759671876732069	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	202	0.7464065329047038	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	120	0.4434098215275468	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	94	0.34733769352991173	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	63	0.2327901563019621	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28	0.10346229168976093	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	30	2.087676E-6	45.000004	45
ATAATAT	25	3.7903912E-5	45.0	32
ACATAAT	25	3.7903912E-5	45.0	30
TAATATC	25	3.7903912E-5	45.0	33
ATATCTC	25	3.7903912E-5	45.0	35
GAGACAA	25	3.7903912E-5	45.0	24
CATAATA	25	3.7903912E-5	45.0	31
GCCCACG	35	6.0251805E-6	38.571426	18
CCACGAG	35	6.0251805E-6	38.571426	20
CCCACGA	35	6.0251805E-6	38.571426	19
ACGAGAC	35	6.0251805E-6	38.571426	22
TATCTCG	35	6.0251805E-6	38.571426	36
ATGCCGT	35	6.0251805E-6	38.571426	44
CGAGCCC	35	6.0251805E-6	38.571426	15
CTCCGAG	35	6.0251805E-6	38.571426	12
CAACATA	30	1.11072644E-4	37.500004	28
AATATCT	30	1.11072644E-4	37.500004	34
AGACAAC	30	1.11072644E-4	37.500004	25
AACATAA	30	1.11072644E-4	37.500004	29
GTATCAA	55	2.5429472E-9	36.81818	1