H23NVBCXX l02n01 48h_76.34100000006cd8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_76.34100000006cd8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	72207
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGTC	873	1.2090240558394616	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	157	0.217430443031839	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	97	0.13433600620438463	No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	96	0.13295109892392704	No Hit
GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTGA	94	0.1301812843630119	No Hit
TTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGTCT	92	0.12741146980209675	Illumina PCR Primer Index 8 (95% over 21bp)
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	84	0.11633221155843616	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGAGACT	105	38.570835	23
TGCCGTC	105	38.570835	45
CCGAGCC	115	37.17334	14
TATGCCG	110	36.817616	43
CCCACGA	110	36.817616	19
TCGTATG	110	36.817616	40
CGAGCCC	110	36.817616	15
ACGAGAC	110	36.817616	22
CCACGAG	110	36.817616	20
CTCGTAT	105	36.42801	39
GACTTGC	105	36.42801	26
CACGAGA	115	35.216846	21
ATGCCGT	115	35.216846	44
GAGACTT	110	34.772194	24
TCTCGTA	110	34.772194	38
GGAATCT	105	34.285187	34
AATCTCG	105	34.285187	36
ATCTCCG	120	33.74948	10
CGTATGC	120	33.74948	41
AGCCCAC	120	33.74948	17