H23NVBCXX l02n01 48h_74.34100000006cbe.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_74.34100000006cbe.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1353
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGTC	715	52.84552845528455	No Hit
TTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGTCT	73	5.395417590539542	Illumina PCR Primer Index 8 (95% over 21bp)
CTCTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCG	11	0.8130081300813009	No Hit
ATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGTCTTC	10	0.7390983000739099	Illumina PCR Primer Index 8 (95% over 23bp)
TCTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGT	8	0.5912786400591279	No Hit
TATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGTCTT	6	0.4434589800443459	Illumina PCR Primer Index 8 (95% over 22bp)
CTTATACACATCTCCGAGCCCACGAGACTACTTGCAATCTCGTATGCCGTC	5	0.36954915003695493	TruSeq Adapter, Index 12 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTC	4	0.29563932002956395	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGTC	4	0.29563932002956395	No Hit
CTTATACACATCTCCGAGCCCACGAGACTGCGACCTATCTCGTATGCCGTC	3	0.22172949002217296	No Hit
AGAGACAGCTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGT	2	0.14781966001478197	No Hit
GTCCTACAGCTGCTTCGCAGGCTGCGAAAACTAAGATGGTGATGGGGATTG	2	0.14781966001478197	No Hit
CTTATACACATCTCCGAGCCCACGAGACATAGACAAATCTCGTATGCCGTC	2	0.14781966001478197	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATTCGTATGCCGTCT	2	0.14781966001478197	No Hit
CGGAGATGTGTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACT	2	0.14781966001478197	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTTATAC	85	39.705883	1
AGCCCAC	90	37.5	17
GTATGCC	90	37.5	42
AATCTCG	90	37.5	36
ATCTCGT	90	37.5	37
ATCTCCG	90	37.5	10
GCCCACG	90	37.5	18
CCACGAG	90	37.5	20
TATGCCG	90	37.5	43
CATCTCC	90	37.5	9
GAGCCCA	90	37.5	16
CACGAGA	90	37.5	21
CCCACGA	90	37.5	19
ACATCTC	90	37.5	8
TCTCGTA	90	37.5	38
ACGAGAC	90	37.5	22
ATGCCGT	90	37.5	44
CGTATGC	90	37.5	41
CGAGCCC	90	37.5	15
CCGAGCC	90	37.5	14