H23NVBCXX l02n01 48h_70.34100000006c7b.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_70.34100000006c7b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4336
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTC	3075	70.91789667896678	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCG	192	4.428044280442804	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGT	95	2.1909594095940963	No Hit
TTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTCT	71	1.6374538745387455	Illumina PCR Primer Index 11 (95% over 21bp)
CTTATACACATCTCCGAGCCTGTCTCTTATACACATCTCCGAGCCCACGAG	19	0.43819188191881914	No Hit
CTTATACACATCTGACGCTGTCTCTTATACACATCTCCGAGCCCACGAGAC	18	0.41512915129151295	No Hit
CTTATACACATCTCCGAGCCCACGAGACGTCTTAGTATCTCGTATGCCGTC	16	0.36900369003690037	No Hit
CGTCAGATGTGTATAAGCTGTCTCTTATACACATCTCCGAGCCCACGAGAC	12	0.27675276752767525	No Hit
CTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTC	8	0.18450184501845018	No Hit
CTTATACACATCTGACGCCTGTCTCTTATACACATCTCCGAGCCCACGAGA	8	0.18450184501845018	No Hit
CTTATACACATCTCCGAGCCCTGTCTCTTATACACATCTCCGAGCCCACGA	8	0.18450184501845018	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGTC	6	0.13837638376383762	No Hit
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTA	5	0.11531365313653136	No Hit
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATTTCGTATGCCGTC	5	0.11531365313653136	No Hit
GCGTCAGATGTGTATAAGCTGTCTCTTATACACATCTCCGAGCCCACGAGA	5	0.11531365313653136	No Hit
CTTATACACATCTACGAGCCCACGAGACGACGCTATATCTCGTATGCCGTC	5	0.11531365313653136	No Hit
GCGTCAGATGTGTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGA	5	0.11531365313653136	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	335	42.985077	45
ATGCCGT	345	41.739132	44
ACGCTAT	360	40.625	30
GACGCTA	360	40.625	29
AGACGAC	360	40.625	25
GACGACG	360	40.625	26
CGACGCT	360	40.625	28
ACGACGC	360	40.625	27
CGAGACG	360	40.625	23
GAGACGA	360	40.625	24
CGCTATA	355	40.563377	31
GCTATAT	350	40.500004	32
CTATATC	345	40.434784	33
ATCTCGT	345	40.434784	37
TATATCT	340	40.367645	34
TATCTCG	340	40.367645	36
ATATCTC	340	40.367645	35
CACGAGA	370	40.135136	21
ACGAGAC	370	40.135136	22
TCTCGTA	350	39.857143	38