H23NVBCXX l02n01 48h_67.34100000006c45.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_67.34100000006c45.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	66594
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTC	525	0.7883593116496982	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	120	0.18019641409135959	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	101	0.151665315193561	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	35	1.1890188E-7	45.000004	39
TATGCCG	35	1.1890188E-7	45.000004	43
TATCTCG	35	1.1890188E-7	45.000004	36
CGCTATA	35	1.1890188E-7	45.000004	31
TCTCGTA	35	1.1890188E-7	45.000004	38
ACGCTAT	35	1.1890188E-7	45.000004	30
TGCCGTC	35	1.1890188E-7	45.000004	45
ATCTCGT	40	3.3932338E-7	39.375	37
GCCCACG	40	3.3932338E-7	39.375	18
CTCCGAG	40	3.3932338E-7	39.375	12
CGACGCT	40	3.3932338E-7	39.375	28
CTATATC	40	3.3932338E-7	39.375	33
CACGAGA	40	3.3932338E-7	39.375	21
ATATCTC	40	3.3932338E-7	39.375	35
AGACGAC	40	3.3932338E-7	39.375	25
GTATGCC	40	3.3932338E-7	39.375	42
TCGTATG	40	3.3932338E-7	39.375	40
ATGCCGT	40	3.3932338E-7	39.375	44
TCCGAGC	50	4.7619324E-8	36.000004	13
CTATTAT	25	0.0020929063	36.000004	1