H23NVBCXX l02n01 48h_59.34100000006bcc.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_59.34100000006bcc.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	90470
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTC	1027	1.1351829335691388	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	136	0.1503260749419697	No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	112	0.12379794406985742	No Hit
TTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTCT	107	0.11827125013816735	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	135	41.666664	45
CGTATGC	140	40.17857	41
CTCGTAT	140	40.17857	39
CCCACGA	140	40.17857	19
TCTCGTA	140	40.17857	38
CCGAGCC	140	40.17857	14
TATGCCG	145	38.793102	43
GTATGCC	145	38.793102	42
CCACGAG	145	38.793102	20
AATCTCG	140	38.571426	36
GCGAATC	135	38.333332	33
ATCTCGT	150	37.500004	37
CTCCGAG	150	37.500004	12
CACGAGA	150	37.500004	21
TCGTATG	150	37.500004	40
CGAGCCC	150	37.500004	15
ATGCCGT	150	37.500004	44
ACGAGAC	150	37.500004	22
CGAATCT	145	37.24138	34
CGAGACC	145	37.24138	23