H23NVBCXX l02n01 48h_54.34100000006b7c.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_54.34100000006b7c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	82080
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTC	847	1.0319200779727096	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	516	0.6286549707602339	No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	287	0.3496588693957115	No Hit
GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCC	236	0.2875243664717349	No Hit
CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTAG	164	0.19980506822612085	No Hit
ACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACACA	125	0.15229044834307992	No Hit
GGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACACACTTT	118	0.14376218323586745	No Hit
CCATATTTCACGTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGT	107	0.13036062378167643	No Hit
GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCAT	102	0.12426900584795322	No Hit
ATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATT	98	0.11939571150097465	No Hit
GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTGA	96	0.11695906432748539	No Hit
ACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCA	92	0.11208576998050682	No Hit
GACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACAC	92	0.11208576998050682	No Hit
TTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTCT	89	0.1084307992202729	No Hit
TTTTTCAAGTCGTCAAGTGGATGTTTCTCATTTTCCATGATTTTCAGTTTT	89	0.1084307992202729	No Hit
GTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAAC	87	0.10599415204678361	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	85	0.0	39.70534	43
ATGCCGT	85	0.0	39.70534	44
ACGAGAC	85	0.0	39.70534	22
CCACGAG	85	0.0	39.70534	20
TGCCGTC	85	0.0	39.70534	45
CGAGACG	75	0.0	38.999474	23
GAGACGA	70	0.0	38.570908	24
GCCCACG	90	0.0	37.499493	18
CTCGTAT	90	0.0	37.499493	39
CACGAGA	90	0.0	37.499493	21
CCCACGA	90	0.0	37.499493	19
GAAAGAT	25	0.0020958886	35.99951	19
ATCTGAT	25	0.0020958886	35.99951	13
ATCTCGT	95	0.0	35.525837	37
GTATGCC	95	0.0	35.525837	42
TCTCGTA	95	0.0	35.525837	38
CGAGCCC	95	0.0	35.525837	15
AGACGAT	65	3.5652192E-10	34.614914	25
TAACCTA	65	3.5652192E-10	34.614914	31
GACGATA	65	3.5652192E-10	34.614914	26