H23NVBCXX l02n01 48h_52.34100000006b53.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_52.34100000006b53.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	109373
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTC	582	0.5321240159820065	No Hit
GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTGA	191	0.17463176469512584	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	136	0.12434513088239328	No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	117	0.10697338465617658	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	95	40.263157	39
TATGCCG	95	40.263157	43
TCTCGTA	95	40.263157	38
CGAGCCC	95	40.263157	15
ATGCCGT	95	40.263157	44
TGCCGTC	95	40.263157	45
TCCGAGC	105	38.57143	13
ACGATAA	70	38.57143	27
GACGATA	70	38.57143	26
CGATAAC	70	38.57143	28
ATCTCGT	100	38.250004	37
ATCTCCG	100	38.250004	10
TATCTCG	100	38.250004	36
TCGTATG	100	38.250004	40
TCTCCGA	100	38.250004	11
ACGAGAC	100	38.250004	22
CGAGACG	90	37.5	23
ACCTATC	80	36.5625	33
AACCTAT	80	36.5625	32
CTCCGAG	105	36.42857	12