H23NVBCXX l02n01 48h_51.34100000006b46.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_51.34100000006b46.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	84274
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTC	545	0.646700049837435	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	196	0.23257469682227022	No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	143	0.1696846002325747	No Hit
GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTGA	116	0.13764624913971094	No Hit
GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCC	113	0.13408643235161496	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCACGA	70	2.0008883E-11	35.350147	19
CGATAAC	65	3.5652192E-10	34.629086	28
CTCGTAT	65	3.583409E-10	34.608536	39
TCTCGTA	65	3.583409E-10	34.608536	38
CCTATCT	65	3.583409E-10	34.608536	34
AGACGAT	70	7.876224E-10	32.155582	25
ACGATAA	70	7.876224E-10	32.155582	27
GACGATA	70	7.876224E-10	32.155582	26
CTATCTC	70	7.930794E-10	32.136497	35
TATGCCG	70	7.930794E-10	32.136497	43
CGAGCCC	70	7.930794E-10	32.136497	15
AACCTAT	70	7.930794E-10	32.136497	32
CGAGACG	70	7.930794E-10	32.136497	23
ATGCCGT	70	7.930794E-10	32.136497	44
TGCCGTC	70	7.930794E-10	32.136497	45
GCCCACG	80	9.640644E-11	30.931381	18
GAGACGA	75	1.6480044E-9	30.011877	24
TCTCCGA	75	1.6480044E-9	30.011877	11
AGCCCAC	75	1.6589183E-9	29.994064	17
ACCTATC	75	1.6589183E-9	29.994064	33