H23NVBCXX l02n01 48h_50.34100000006b39.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_50.34100000006b39.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12226
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTC	674	5.51284148535907	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	77	0.6298053328971045	No Hit
TTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTCT	62	0.5071159823327336	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35	0.2862751513168657	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	17	0.13904793063962048	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16	0.13086864060199577	No Hit
GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTGA	16	0.13086864060199577	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGTC	14	0.11451006052674627	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14	0.11451006052674627	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13	0.10633077048912154	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATCTCCG	110	38.863636	10
CATCTCC	110	38.863636	9
CGAGCCC	110	38.863636	15
CCGAGCC	110	38.863636	14
GCCCACG	105	38.57143	18
TGCCGTC	105	38.57143	45
ATGCCGT	105	38.57143	44
CGATAAC	95	37.894737	28
AACCTAT	95	37.894737	32
AGACGAT	95	37.894737	25
GACGATA	95	37.894737	26
ACCTATC	95	37.894737	33
ACGATAA	95	37.894737	27
CGAGACG	95	37.894737	23
GAGACGA	95	37.894737	24
ACATCTC	115	37.173912	8
TCTCCGA	115	37.173912	11
TCCGAGC	115	37.173912	13
CTCCGAG	115	37.173912	12
AGCCCAC	110	36.81818	17