H23NVBCXX l02n01 48h_42.34100000006ab0.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_42.34100000006ab0.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	103678
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCATTCCGAATCTCGTATGCCGTC	783	0.7552229016763441	RNA PCR Primer, Index 46 (95% over 21bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	134	0.12924632033796948	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGAGCC	105	44.99566	14
CGAGCCC	105	44.99566	15
CTCGTAT	110	42.9504	39
TATGCCG	110	42.9504	43
ATGCCGT	110	42.9504	44
TGCCGTC	110	42.9504	45
CATTCCG	95	42.648037	29
ATTCCGA	95	42.648037	30
CGAATCT	95	42.627464	34
CCGAATC	95	42.627464	33
CCACGAG	120	41.24602	20
CACGAGA	115	41.082993	21
CCCACGA	115	41.082993	19
TCTCGTA	115	41.082993	38
TCCGAAT	100	40.496094	32
TTCCGAA	100	40.496094	31
ATCTCGT	120	39.3712	37
ATCTCCG	120	39.3712	10
GCCCACG	120	39.3712	18
CGTATGC	120	39.3712	41