H23NVBCXX l02n01 48h_41.34100000006aa4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_41.34100000006aa4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	95029
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCATTCCGAATCTCGTATGCCGTC	531	0.5587767944522198	RNA PCR Primer, Index 46 (95% over 21bp)
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	101	0.10628334508413222	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCCGAAT	75	42.0	32
CCGAATC	75	42.0	33
CTCGTAT	80	39.375	39
TTCCGAA	80	39.375	31
CATTCCG	80	39.375	29
CGAATCT	80	39.375	34
ATCTCGT	85	37.058823	37
ATCTCCG	85	37.058823	10
ACCATTC	85	37.058823	27
GAATCTC	85	37.058823	35
GACCATT	85	37.058823	26
ATTCCGA	85	37.058823	30
AATCTCG	85	37.058823	36
TCGTATG	85	37.058823	40
CCACGAG	85	37.058823	20
GCCCACG	90	35.0	18
CGTATGC	90	35.0	41
CACGAGA	90	35.0	21
TATGCCG	90	35.0	43
CCCACGA	90	35.0	19