H23NVBCXX l02n01 48h_36.34100000006a54.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_36.34100000006a54.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	70867
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTGCGACCTATCTCGTATGCCGTC	1031	1.4548379358516657	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	151	0.21307519720038948	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	104	0.14675377820424174	No Hit
TTATACACATCTCCGAGCCCACGAGACTGCGACCTATCTCGTATGCCGTCT	92	0.12982064994990616	Illumina Paired End PCR Primer 2 (95% over 21bp)
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	90	0.1269984619075169	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	80	0.11288752169557056	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCTAGA	20	6.9647515E-4	45.031075	1
GCGACCT	180	0.0	41.249355	30
CGACCTA	180	0.0	41.249355	31
TGCGACC	180	0.0	41.249355	29
GACCTAT	180	0.0	41.249355	32
CGTATGC	190	0.0	40.262527	41
TATGCCG	190	0.0	40.262527	43
CCCACGA	190	0.0	40.262527	19
TATCTCG	190	0.0	40.262527	36
ACGAGAC	190	0.0	40.262527	22
CCACGAG	190	0.0	40.262527	20
ACTGCGA	185	0.0	40.134506	27
CTGCGAC	185	0.0	40.134506	28
CCTATCT	185	0.0	40.134506	34
GACTGCG	185	0.0	40.134506	26
TGCCGTC	185	0.0	40.134506	45
CTCGTAT	195	0.0	39.230152	39
TCCGAGC	195	0.0	39.230152	13
CACGAGA	195	0.0	39.230152	21
GTATGCC	195	0.0	39.230152	42