H23NVBCXX l02n01 48h_35.34100000006a47.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 48h_35.34100000006a47.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	104492
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTGCGACCTATCTCGTATGCCGTC	468	0.447881177506412	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	396	0.37897638096696395	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	226	0.2162845002488229	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	213	0.20384335642920035	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	149	0.14259464839413544	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	142	0.13589557095280022	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGAGC	50	1.0568328E-9	40.51595	13
ACCTATC	50	1.0622898E-9	40.496555	33
TATCTCG	50	1.0622898E-9	40.496555	36
TATGCCG	45	1.9010258E-8	39.996597	43
TGCCGTC	45	1.9010258E-8	39.996597	45
CCGAGCC	55	2.6884663E-9	36.83268	14
GCCCACG	55	2.7011993E-9	36.81505	18
ACTGCGA	55	2.7011993E-9	36.81505	27
GACTGCG	55	2.7011993E-9	36.81505	26
CCACGAG	55	2.7011993E-9	36.81505	20
GACCTAT	55	2.7011993E-9	36.81505	32
TCTCGTA	50	4.8103175E-8	35.996937	38
TCCACTA	25	0.0020992456	35.996937	26
TCGTATG	50	4.8103175E-8	35.996937	40
AAGTGTC	25	0.0020992456	35.996937	7
ATGCCGT	45	8.6054024E-7	34.99702	44
ATCTCCG	60	6.2900654E-9	33.76329	10
ATCTCGT	60	6.319169E-9	33.747128	37
CTATCTC	60	6.319169E-9	33.747128	35
CGACCTA	60	6.319169E-9	33.747128	31