H23NVBCXX l02n01 36h_94.341000000061fd.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 36h_94.341000000061fd.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	100338
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTC	1817	1.8108792282086548	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	509	0.507285375431043	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	306	0.3049692040901752	No Hit
TTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTCT	302	0.3009826785465128	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	287	0.28603320775777874	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	221	0.22025553628734876	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	123	0.12258566046761946	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCCCACG	230	39.130005	18
CGAGACC	230	39.130005	23
ACGAGAC	230	39.130005	22
GGATAAT	225	38.99957	32
CACGAGA	235	38.297447	21
CCCACGA	235	38.297447	19
TCTCGTA	230	38.151752	38
TCGTATG	230	38.151752	40
CGAGCCC	240	37.499584	15
CCTGGAT	240	37.499584	29
CGTATGC	235	37.34001	41
TATGCCG	235	37.34001	43
ATGCCGT	230	37.173504	44
TGCCGTC	230	37.173504	45
ATCTCCG	245	36.734287	10
CTCCGAG	245	36.734287	12
GAGCCCA	245	36.734287	16
CTGGATA	245	36.734287	30
GATAATC	240	36.56209	33
CTCGTAT	240	36.56209	39