H23NVBCXX l02n01 36h_87.34100000006176.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 36h_87.34100000006176.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	106426
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTC	6209	5.834100689681093	No Hit
TTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTCT	238	0.22362956420423583	RNA PCR Primer, Index 44 (95% over 22bp)
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	207	0.19450134365662525	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGT	137	0.1287279424200853	No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	119	0.11181478210211791	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGGAA	20	7.004792E-4	44.99953	5
TGCCGTC	665	0.0	42.631134	45
TCTCGTA	680	0.0	42.02162	38
ATCTCGT	690	0.0	41.738693	37
CTCGTAT	690	0.0	41.738693	39
TATGCCG	685	0.0	41.714893	43
TCGTATG	685	0.0	41.714893	40
CACGAGA	695	0.0	41.438416	21
ATGCCGT	685	0.0	41.38643	44
AACATAA	670	0.0	41.30554	29
ACGAGAC	695	0.0	41.11468	22
CCACGAG	695	0.0	41.11468	20
TATCTCG	685	0.0	41.057964	36
TAATATC	675	0.0	40.99957	33
ATAATAT	675	0.0	40.99957	32
CATAATA	675	0.0	40.99957	31
CGTATGC	700	0.0	40.821003	41
CCCACGA	700	0.0	40.821003	19
ATATCTC	685	0.0	40.7295	35
ACAACAT	680	0.0	40.698105	27