H23NVBCXX l02n01 36h_85.3410000000615d.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 36h_85.3410000000615d.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	186717
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTC	3352	1.7952302147099621	No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	301	0.1612065318101726	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	275	0.14728171510896168	No Hit
TTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTCT	239	0.1280011996765158	RNA PCR Primer, Index 44 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	425	41.293625	45
ACGAGAC	430	40.81347	22
TATGCCG	435	40.34435	43
ATGCCGT	435	40.34435	44
TATCTCG	415	40.120007	36
CGAGACA	415	40.120007	23
TCGTATG	440	39.885887	40
CGTATGC	445	39.43773	41
TCTCGTA	435	39.30988	38
CACGAGA	450	38.999535	21
CCACGAG	450	38.999535	20
CTCGTAT	445	38.932117	39
GCCCACG	460	38.15172	18
CCCACGA	460	38.15172	19
GTATGCC	460	38.15172	42
TAATATC	425	38.117195	33
ATCTCGT	450	37.999546	37
CATAATA	440	37.840458	31
CAACATA	450	37.499554	28
AGACAAC	445	37.415283	25