H23NVBCXX l02n01 36h_84.34100000006140.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 36h_84.34100000006140.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	115105
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTC	3995	3.4707441032101127	No Hit
TTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTCT	374	0.3249207245558403	RNA PCR Primer, Index 44 (95% over 22bp)
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	215	0.18678597802006863	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	187	0.16246036227792016	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGT	129	0.11207158681204117	No Hit
AAAAAGTACTCTGCGTTGATACCACCTGTCTCTTATACACATCTCCGAGCC	122	0.10599018287650405	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	445	40.449436	45
ATGCCGT	465	39.19355	44
TATGCCG	470	38.776596	43
TATCTCG	460	38.641308	36
GCCCACG	480	38.437496	18
CACGAGA	480	38.437496	21
ACGAGAC	480	38.437496	22
ATAATAT	475	38.36842	32
CATAATA	475	38.36842	31
CTCGTAT	465	38.225807	39
CAACATA	485	38.041233	28
CCCACGA	485	38.041233	19
CGTATGC	480	37.968746	41
AATATCT	470	37.81915	34
TCTCGTA	470	37.81915	38
GTATGCC	485	37.577316	42
ATCTCGT	475	37.42105	37
ACAACAT	495	37.272728	27
CCACGAG	495	37.272728	20
TAATATC	485	37.1134	33