H23NVBCXX l02n01 36h_81.3410000000610c.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 36h_81.3410000000610c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	50412
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1406	2.7890184876616675	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	552	1.0949773863365866	No Hit
CTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTC	527	1.0453860192017774	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	303	0.6010473696738872	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	241	0.4780607791795604	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	156	0.30945013092120927	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	75	0.1487741014044275	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	54	0.10711735301118781	No Hit
TTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTCT	54	0.10711735301118781	RNA PCR Primer, Index 44 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATAATAT	75	45.000004	32
CACGAGA	80	45.0	21
TATCTCG	80	45.0	36
ACGAGAC	80	45.0	22
CCACGAG	80	45.0	20
TGCCGTC	80	45.0	45
GCCCACG	85	42.35294	18
CTCGTAT	85	42.35294	39
CTCCGAG	85	42.35294	12
TCCGAGC	85	42.35294	13
TATGCCG	85	42.35294	43
CCCACGA	85	42.35294	19
ATATCTC	85	42.35294	35
TCTCGTA	85	42.35294	38
CCGAGCC	85	42.35294	14
CGAGCCC	85	42.35294	15
TCTCCGA	85	42.35294	11
ATGCCGT	85	42.35294	44
TAATATC	80	42.1875	33
CAACATA	80	42.1875	28