H23NVBCXX l02n01 36h_72.3410000000606a.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 36h_72.3410000000606a.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	195540
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTC	2508	1.2826020251610923	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	860	0.43980771197708907	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	558	0.2853636084688555	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	524	0.2679758617162729	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	505	0.25825917970747675	No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	461	0.23575738979236985	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	365	0.18666257543213666	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	320	0.16364938120077735	No Hit
GCGTTGATACCACTGCTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	314	0.16058095530326277	No Hit
GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCC	283	0.14472742149943746	No Hit
GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTGA	266	0.13603354812314616	No Hit
TTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTCT	254	0.129896696328117	Illumina PCR Primer Index 11 (95% over 21bp)
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	200	0.10228086325048584	No Hit
GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCAT	197	0.10074665030172854	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGACGA	245	40.406326	24
CGCTATA	240	40.310665	31
ACGCTAT	240	40.310665	30
GACGACG	240	40.310665	26
CGAGACG	250	39.5982	23
CGACGCT	245	39.488003	28
ACGACGC	245	39.488003	27
TCGTATG	260	38.94054	40
ATGCCGT	260	38.94054	44
AGACGAC	250	38.698242	25
TATCTCG	250	38.698242	36
GACGCTA	250	38.698242	29
TATGCCG	265	38.205807	43
CCACGAG	265	38.205807	20
TGCCGTC	265	38.205807	45
CTCGTAT	260	38.07519	39
TCTCGTA	260	38.07519	38
CTATATC	250	37.798283	33
GCCCACG	270	37.49829	18
CCCACGA	270	37.49829	19