H23NVBCXX l02n01 36h_69.34100000006034.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 36h_69.34100000006034.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	221726
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTC	4843	2.184227379738957	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	410	0.18491291052921174	No Hit
TTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTCT	245	0.1104967392186753	Illumina PCR Primer Index 11 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	415	40.662445	45
CGCTATA	440	38.35208	31
ACGCTAT	440	38.35208	30
ACGACGC	440	38.35208	27
CTCGTAT	450	37.99981	39
TATGCCG	450	37.99981	43
GACGCTA	445	37.921158	29
GACGACG	445	37.921158	26
ATCTCGT	455	37.58223	37
AGACGAC	455	37.58223	25
GAGACGA	455	37.58223	24
TATCTCG	455	37.58223	36
CGACGCT	450	37.499813	28
TCTCGTA	460	37.17373	38
ATGCCGT	455	37.087727	44
CGAGACG	465	36.77401	23
CCACGAG	475	36.473503	20
TCGTATG	470	36.382797	40
GCCCACG	480	36.09357	18
CTATATC	480	36.09357	33