H23NVBCXX l02n01 36h_65.34100000005fe6.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 36h_65.34100000005fe6.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15773
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	707	4.482343244785393	No Hit
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTC	497	3.15095416217587	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	232	1.4708679388829011	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	136	0.8622329296899764	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	125	0.7924935015532872	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	75	0.4754961009319723	No Hit
TTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTCT	49	0.3106574526088886	Illumina PCR Primer Index 11 (95% over 21bp)
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29	0.18385849236036264	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23	0.14581880428580485	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20	0.12679896024852597	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATATC	35	1.1132215E-7	45.0	33
ATCTCGT	40	6.1099854E-9	45.0	37
ATCTCCG	40	6.1099854E-9	45.0	10
TATATCT	35	1.1132215E-7	45.0	34
TGCCGTC	40	6.1099854E-9	45.0	45
CCACGAG	40	6.1099854E-9	45.0	20
TATGCCG	40	6.1099854E-9	45.0	43
CATCTCC	40	6.1099854E-9	45.0	9
GTATCAA	70	0.0	45.0	1
GCTATAT	35	1.1132215E-7	45.0	32
TCTCGTA	40	6.1099854E-9	45.0	38
ACGAGAC	40	6.1099854E-9	45.0	22
TATCTCG	35	1.1132215E-7	45.0	36
AGACGAC	35	1.1132215E-7	45.0	25
ATGCCGT	40	6.1099854E-9	45.0	44
CGTATGC	40	6.1099854E-9	45.0	41
GACGACG	35	1.1132215E-7	45.0	26
CGAGCCC	40	6.1099854E-9	45.0	15
CCGAGCC	40	6.1099854E-9	45.0	14
CGACGCT	35	1.1132215E-7	45.0	28