H23NVBCXX l02n01 36h_64.34100000005fd9.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 36h_64.34100000005fd9.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	209402
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTC	6473	3.0911834652964156	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	960	0.4584483433778092	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	836	0.3992320990248422	No Hit
TTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTCT	714	0.3409709553872456	No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	619	0.2956036714071499	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	546	0.260742495296129	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	493	0.23543232633881245	No Hit
GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCAT	488	0.23304457455038635	No Hit
CTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	450	0.21489766095834803	No Hit
GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCC	373	0.17812628341658626	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	369	0.17621608198584543	No Hit
GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTGA	341	0.1628446719706593	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	318	0.1518610137438993	No Hit
GCGTTGATACCACTGCTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	290	0.1384896037287132	No Hit
GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCAT	274	0.1308487980057497	No Hit
CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTAG	248	0.11843248870593404	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	229	0.1093590319099149	No Hit
GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTGT	217	0.10362842761769228	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	735	38.87652	45
CTCGTAT	750	38.09899	39
AGGCGAA	750	38.09899	31
CAAGGCG	750	38.09899	29
GGCGAAT	750	38.09899	32
ATGCCGT	750	38.09899	44
GCGAATC	745	38.05268	33
TATGCCG	755	37.84668	43
TCTCGTA	755	37.84668	38
CCCACGA	765	37.64606	19
CGAGCCC	765	37.64606	15
CGAGACC	760	37.597687	23
CGAATCT	755	37.548676	34
GCCCACG	770	37.401604	18
CACGAGA	770	37.401604	21
CCACGAG	770	37.401604	20
CCGAGCC	775	37.160305	14
ACGAGAC	775	37.160305	22
ATCTCGT	775	36.86999	37
CGTATGC	775	36.86999	41