H23NVBCXX l02n01 36h_63.34100000005fcc.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 36h_63.34100000005fcc.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	222049
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTC	2844	1.2807983823390334	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	807	0.3634332962544303	No Hit
GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCC	356	0.16032497331670037	No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	303	0.13645636773865227	No Hit
TTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTCT	229	0.10313039013911343	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGAATC	330	42.270824	33
AGGCGAA	325	42.228867	31
GGCGAAT	325	42.228867	32
CGAATCT	335	40.968307	34
TGCCGTC	385	40.90725	45
CGAGACC	345	40.432964	23
CGTATGC	390	40.382797	41
TATGCCG	390	40.382797	43
ACGAGAC	390	40.382797	22
AAGGCGA	340	40.37492	30
CTCGTAT	385	40.322857	39
TCGTATG	395	39.871624	40
ATGCCGT	395	39.871624	44
CAAGGCG	345	39.78978	29
GCCCACG	400	39.373226	18
CCCACGA	400	39.373226	19
CCACGAG	405	38.88714	20
TCTCGTA	400	38.81075	38
GTATGCC	410	38.412903	42
ATCTCGT	405	38.331608	37