H23NVBCXX l02n01 36h_61.34100000005fa3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 36h_61.34100000005fa3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	306554
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTC	3320	1.0830065828532658	No Hit
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	846	0.27597095454634424	No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	459	0.14972892214748462	No Hit
GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCC	408	0.13309237524220854	No Hit
CTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	324	0.10569100386881268	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATCTCGT	365	39.450912	37
TATGCCG	365	39.450912	43
TGCCGTC	365	39.450912	45
CGAGACC	345	39.1293	23
CTCGTAT	375	38.998867	39
TCTCGTA	370	38.91779	38
ACGAGAC	370	38.91779	22
GCGAATC	350	38.57031	33
CACGAGA	370	38.3097	21
CCCACGA	370	38.3097	19
CCGAGCC	370	38.3097	14
GCCCACG	365	38.21807	18
CGAGCCC	365	38.21807	15
CGAATCT	355	38.027065	34
GGCGAAT	355	38.027065	32
AGGCGAA	360	37.498913	31
TCGTATG	390	37.498913	40
AAGGCGA	365	36.98523	30
ATGCCGT	390	36.92201	44
TCCGAGC	385	36.817116	13