H23NVBCXX l02n01 36h_45.34100000005e8a.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 36h_45.34100000005e8a.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	330352
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCATTCCGAATCTCGTATGCCGTC	3419	1.0349566522981546	RNA PCR Primer, Index 46 (95% over 21bp)
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAA	708	0.2143168499055553	No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCAT	475	0.1437860221823994	No Hit
GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTGA	380	0.11502881774591951	No Hit
GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCC	331	0.1001961544049983	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	440	38.861282	39
TCTCGTA	440	38.861282	38
CATTCCG	425	38.644722	29
ATTCCGA	425	38.644722	30
ATCTCGT	450	38.49767	37
CGAGCCC	465	38.22349	15
CCCACGA	460	38.149864	19
ACGAGAC	460	38.149864	22
CCGAATC	425	38.11534	33
TGCCGTC	455	38.080383	45
CGAGACC	440	37.838615	23
TCCGAGC	470	37.81686	13
TCTCCGA	465	37.75108	11
GCCCACG	465	37.73965	18
CTCCGAG	465	37.73965	12
CGAATCT	430	37.67214	34
TATGCCG	455	37.580143	43
CCACGAG	470	37.338165	20
CCGAGCC	480	37.02901	14
AATCTCG	450	36.99776	36