H23NVBCXX l02n01 36h_17.34100000005c8c.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 36h_17.34100000005c8c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	76346
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2953	3.867917114190658	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1682	2.2031278652450683	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1041	1.3635291960286067	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	762	0.9980876535771357	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	731	0.9574830377491945	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGTC	483	0.6326461111256647	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	416	0.5448877478846305	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	316	0.4139051161815943	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	278	0.36413171613444056	No Hit
CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	171	0.22398030021219187	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	160	0.20957221072485788	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	139	0.18206585806722028	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	124	0.16241846331176488	No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	93	0.12181384748382364	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCTCGT	40	6.672053E-9	45.0	37
CGTATGC	40	6.672053E-9	45.0	41
CTCGTAT	40	6.672053E-9	45.0	39
TCTCGTA	40	6.672053E-9	45.0	38
TCGTATG	40	6.672053E-9	45.0	40
CGAGACT	40	6.672053E-9	45.0	23
ACGAGAC	40	6.672053E-9	45.0	22
TGCCGTC	40	6.672053E-9	45.0	45
CTATCTC	45	1.888111E-8	39.999996	35
CACGAGA	45	1.888111E-8	39.999996	21
TATGCCG	45	1.888111E-8	39.999996	43
TATCTCG	45	1.888111E-8	39.999996	36
ATGCCGT	45	1.888111E-8	39.999996	44
CCACGAG	45	1.888111E-8	39.999996	20
GATCCTA	40	3.401983E-7	39.375	31
TCCTATC	40	3.401983E-7	39.375	33
GAGACTA	40	3.401983E-7	39.375	24
GTGTAGC	30	1.1299635E-4	37.499996	1
CGTGGAA	25	0.0020948292	36.0	9
CATGCTG	25	0.0020948292	36.0	9