H23NVBCXX l02n01 24h_94.341000000067f7.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 24h_94.341000000067f7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1477
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGTTCATTAATCTCGTATGCCGTC	18	1.2186865267433988	RNA PCR Primer, Index 45 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACGAGAGTTGATCTCGTATGCCGTC	10	0.6770480704129994	RNA PCR Primer, Index 23 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACCTATTCAAATCTCGTATGCCGTC	9	0.6093432633716994	RNA PCR Primer, Index 13 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACAGGATGTGATCTCGTATGCCGTC	6	0.4062288422477996	No Hit
CTTATACACATCTCCGAGCCCACGAGACGTCTTAGTATCTCGTATGCCGTC	5	0.3385240352064997	No Hit
CTTATACACATCTCCGAGCCCACGAGACAGTGTCTTATCTCGTATGCCGTC	4	0.2708192281651997	No Hit
CTTATACACATCTCCGAGCCCACGAGACATAGACAAATCTCGTATGCCGTC	4	0.2708192281651997	No Hit
CTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTC	3	0.2031144211238998	No Hit
CTTATACACATCTCCGAGCCCACGAGACTGCGACCTATCTCGTATGCCGTC	3	0.2031144211238998	No Hit
CTTATACACATCTCCGAGCCCACGAGACCCTGAATATCTCGTATGCCGTCT	3	0.2031144211238998	RNA PCR Primer, Index 19 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACAGATATAAATCTCGTATGCCGTC	3	0.2031144211238998	No Hit
CTATTATTGTTGGGGTAATGAATGAGGCAAATAGATTTTCGTTCATTTTAA	2	0.13540961408259986	No Hit
GTTAGTATGAGTAACAAGAATTCCAATTCTCCAGGCATACGCGTATAACAA	2	0.13540961408259986	No Hit
ATTTATTACTGTGTTTCCATTGTCAAATTTTATGATCTTGGCCTTTCTTTC	2	0.13540961408259986	No Hit
CCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTAAAGGCTGTCTCTT	2	0.13540961408259986	No Hit
CATTTACACCTACTACCCAACTATCCATAAATCTAAGTATAGCCATTCCAC	2	0.13540961408259986	No Hit
CTTATACACATCTCAGAGCCCACGAGACCTATTCAAATCTCGTATGCCGTC	2	0.13540961408259986	No Hit

Adapter Content

Adapter graph

Kmer Content

No overrepresented Kmers