H23NVBCXX l02n01 24h_74.341000000066b4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23NVBCXX l02n01 24h_74.341000000066b4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	247999
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGTC	494	0.19919435159012738	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAACTGTCTCTTATAC	398	0.1604845180827342	No Hit
GATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGA	386	0.15564578889431005	No Hit
TTTTTGCGTTGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATAC	348	0.14032314646430027	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCCTGTCTCTTATACACATCTCCGA	322	0.12983923322271462	No Hit
GATACCACCCCGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCG	277	0.11169399876612406	No Hit
GCGTTGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATC	257	0.10362945011875048	No Hit
CGTTGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCT	248	0.10000040322743237	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGCCGT	55	2.730303E-9	36.817856	44
TTCCGAC	25	0.002104022	35.99968	3
ATTGCGT	25	0.002104022	35.99968	16
TGCCGTC	60	6.3901098E-9	33.749695	45
GGTCTAC	40	6.14547E-4	28.13042	1
ACTTGGG	45	0.0012239066	24.999777	32
CGGGCTC	45	0.0012239066	24.999777	17
AGGATTA	200	0.0	24.749779	5
CGGGACA	55	1.3640632E-4	24.545237	17
GATTAGT	205	0.0	23.048574	7
CTAGGAT	205	0.0	23.048574	3
CTCTGGT	50	0.0022571115	22.504337	2
CTCGTAT	90	3.2657408E-7	22.499798	39
AGTGTAC	160	0.0	22.499798	27
GCTAGGA	205	0.0	21.95545	2
ATTAGTC	220	0.0	21.477081	8
TAGGATT	220	0.0	21.477081	4
GGATTAG	220	0.0	21.477081	6
TAGTCCC	220	0.0	21.477081	10
CGTATGC	95	5.496204E-7	21.315598	41